Protein Concepts Dictionary

Tableau information

Concept source:  d4qfej_  amino acid (a.a.) range (PRO4)(HIS212)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEHEEEHEEHHEHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO4)   (ASN10) E1
	   (PRO12)   (ILE18) E2
	   (GLY29)   (ASP45) H3
	   (SER49)   (GLY55) E4
	   (ARG89)   (SER93) E5
	   (LYS94)  (ILE100) E6
	  (VAL105)  (CYS115) H7
	  (ASP116)  (GLU122) E8
	  (ASP123)  (GLY127) E9
	  (GLY140)  (LEU148) H10
	  (HIS151)  (GLY161) H11
	  (ARG162)  (ALA166) E12
	  (ALA166)  (ILE172) H13
	  (ASN176)  (PRO180) E14
	  (THR181)  (ARG185) H15
	  (ARG185)  (ARG197) H16
	  (GLN200)  (HIS212) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      161.2°   E2                                                                                                              
H3      -21.5° -175.7°   H3                                                                                                       
E4      141.2°  -20.1°  162.6°   E4                                                                                                
E5      -12.6°  165.1°   19.2° -146.4°   E5                                                                                         
E6      116.3°  -44.9°  137.6°  -25.0°  123.1°   E6                                                                                  
H7      -26.2°  169.6°   -6.1° -165.3°  -25.2° -140.8°   H7                                                                           
E8      100.2°  -61.3°  121.7°  -41.2°  105.8°  -17.7° -125.9°   E8                                                                    
E9     -123.3°   73.3° -103.0°   92.5° -121.0°  114.4°  -97.5° -132.1°   E9                                                             
H10      40.3° -126.9°   52.8° -112.7°  -52.9°  -90.7°   52.9°  -81.4° -118.1°   H10                                                     
H11     145.6°  -29.6°  153.8°   32.7°  139.1°   51.3° -158.0°   60.6°  -87.3°  141.6°   H11                                              
E12      24.2° -142.1°   41.9° -123.3°   23.3° -100.9°   47.7°  -83.3°  144.2°   52.7° -121.5°   E12                                       
H13     -62.8°  130.5°  -45.2°  143.7°  -64.4° -144.9°  -39.2° -145.5°   61.4°   66.3° -148.3°  -86.3°   H13                                
E14      93.2°  -71.8°  112.3°  -54.6°   93.3°  -40.2°  118.2°  -27.4°  143.1°  -92.5°   56.1°  -70.4° -155.4°   E14                         
H15     -74.3° -123.1°   56.2° -139.0°   63.8° -156.5°   55.4° -150.2°   69.1°  108.3° -107.6°   81.1°   58.2°  122.8°   H15                  
H16     -47.7°  150.4°  -26.3°  169.8°  -43.6°  161.9°   21.9°  147.8°  -77.4°   71.3° -146.2°   66.8°  -27.9°  135.5°  -38.8°   H16           
H17     139.6°   46.0° -129.8°   59.4° -147.6°   75.5°  123.8°   92.5°  -41.7°  105.8°  -73.2°  158.5°   85.4° -113.5° -110.8°  110.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qkaf_ :     (LEU4)  (GLY215)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
 d3qkac_ :     (LEU4)  (ILE229)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
 d4qfeg_ :     (PRO4)  (HIS212)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4qfej_ :     (PRO4)  (HIS212)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4qfel_ :     (PRO4)  (ARG231)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4qfek_ :     (PRO4)  (VAL232)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4qfef_ :     (PRO4)  (GLU216)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4qfeb_ :     (PRO4)  (HIS212)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4qfed_ :     (PRO4)  (HIS212)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d4qfec_ :     (PRO4)  (SER230)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14