Protein Concepts Dictionary

Tableau information

Concept source:  d1hr6h1  amino acid (a.a.) range (GLY25)(PRO233)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEEHHHEEHHHHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY25)   (LEU31) E1
	   (GLY34)   (ASN44) E2
	   (SER46)   (ILE52) E3
	   (GLY57)   (ASN62) H4
	   (THR68)   (GLY79) H5
	   (PRO84)   (GLY96) H6
	   (GLY96)  (ARG105) E7
	  (THR108)  (SER114) E8
	  (ILE119)  (THR131) H9
	  (ASP136)  (ARG142) H10
	  (GLU143)  (TYR158) H11
	  (TYR158)  (LYS172) H12
	  (PRO183)  (SER189) H13
	  (ARG192)  (TYR203) H14
	  (MET208)  (GLY214) E15
	  (ASP217)  (LYS227) H16
	  (LYS227)  (PRO233) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      150.7°   E2                                                                                                              
E3      -44.6°  162.0°   E3                                                                                                       
H4      -32.2° -165.6°   14.3°   H4                                                                                                
H5       88.1°  -62.8°  131.9°  117.8°   H5                                                                                         
H6      149.6°  -27.9° -151.5°  164.4°   73.6°   H6                                                                                  
E7      -76.2°  132.6°  -32.2°  -46.2°  164.0°  121.9°   E7                                                                           
E8      119.4°  -32.7°  163.9° -150.0°  -32.2°   42.2°  163.7°   E8                                                                    
H9      -48.5°  148.6°  -18.5°  -18.4°  126.1° -159.1°  -39.4°  155.0°   H9                                                             
H10    -131.3°   70.7°  -91.3° -100.5°  125.2°  -78.8°  -66.0°  102.6°  -83.0°   H10                                                     
H11    -143.2°   65.7°  -98.7° -111.8°  128.5°   61.2°  -67.0°   97.4°  -98.1°  -27.3°   H11                                              
H12     -56.2°  144.9°  -40.3°  -47.7°  127.6°  117.3°  -44.4°  138.4°  -58.8° -107.0°  -95.8°   H12                                       
H13      51.0° -100.7°   95.6°   82.8°  -38.6°  104.2°  126.6°  -68.5°   96.6° -156.4°  165.2°   92.6°   H13                                
H14    -109.5°   79.1°  105.9°  114.3°  -97.3°   51.3°   90.9°  -79.6° -123.7°  100.9°   73.5°   66.7°  -98.9°   H14                         
E15     145.0°   -7.8°  169.7° -169.7°  -56.9°  -25.8°  138.9°  -25.7°  155.5°   78.4°   71.9°  142.6°  -94.2°  -75.9°   E15                  
H16     -25.4°  145.5°  -39.1°  -25.3°   95.0°  168.6°  -69.5°  126.6°  -31.9° -108.8° -129.0°  -69.4°   65.4° -132.4°  145.4°   H16           
H17     -49.9°  158.2°    6.3°   20.5°  137.7° -145.3°  -26.4°  169.1°   22.4°  -87.9°  -93.3°  -37.3°  100.7° -101.4° -165.1°  -45.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hr6h1 :    (GLY25)  (PRO233)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) beta chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1hr7d1 :    (GLY25)  (PRO233)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) beta chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1hr8d1 :    (GLY25)  (PRO233)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) beta chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1hr7b1 :    (GLY25)  (PRO233)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) beta chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1hr6b1 :    (GLY25)  (PRO233)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) beta chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1hr7f1 :    (GLY25)  (PRO233)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) beta chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1hr6d1 :    (GLY25)  (PRO233)   [view usage] : d.185.1.1 |LuxS/MPP-like metallohydrolase |LuxS/MPP-like metallohydrolase |MPP-like |Mitochondrial processing peptidase (MPP) beta chain |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.185