Protein Concepts Dictionary

Tableau information

Concept source:  d1c0fa2  amino acid (a.a.) range (GLY150)(TRP356)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEEHHHEEHHHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY150)  (GLY156) E1
	  (GLY158)  (GLU167) E2
	  (ILE175)  (ASP179) E3
	  (GLY182)  (ARG196) H4
	  (THR202)  (LYS215) H5
	  (PHE223)  (ALA231) H6
	  (LEU236)  (LEU242) E7
	  (GLN246)  (ASN252) E8
	  (GLU253)  (GLN263) H9
	  (ILE274)  (LYS284) H10
	  (ASP286)  (ASN296) H11
	  (ASN296)  (GLY301) E12
	  (GLY301)  (PRO307) H13
	  (ILE309)  (ALA321) H14
	  (LYS326)  (ALA331) E15
	  (SER338)  (LEU349) H16
	  (PHE352)  (TRP356) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      163.9°   E2                                                                                                              
E3      -16.9°  172.8°   E3                                                                                                       
H4      -52.4° -140.6°   35.7°   H4                                                                                                
H5     -145.4°  -40.3°  133.7°  101.6°   H5                                                                                         
H6      -39.4°  143.7°  -29.2°  -29.0°  106.3°   H6                                                                                  
E7      -44.6°  120.0°  -61.3°  -96.0°  140.9°  -74.6°   E7                                                                           
E8      145.4°  -49.2°  133.8°  106.5°  -55.0° -133.2°  148.9°   E8                                                                    
H9      127.5°  -52.9°  134.3°  138.3°  -87.0° -162.4°  102.4°   46.7°   H9                                                             
H10     144.2°  -30.5°  156.5°  154.8°  -69.2°  173.4°  105.7°  -48.7°   24.2°   H10                                                     
H11     -55.3°  121.0°  -52.0°  -52.5°  -91.4°   26.6°   72.3° -138.6°  169.2°  146.9°   H11                                              
E12     -13.2°  150.8°  -29.8°  -64.7° -147.6°  -47.3°  -31.5°  154.6°  123.3°  134.8°  -56.6°   E12                                       
H13      93.2°  -95.1°   79.1°   47.9°   54.9°   54.5°  125.0°  -86.0° -132.4° -122.5°  -53.0° -101.7°   H13                                
H14     132.2°  -59.9°  125.0°  106.3°   71.9°  135.3° -135.1°   17.0°  -37.6°  -48.9° -150.7°  138.8°   98.2°   H14                         
E15     -33.8°  130.5°  -47.9°  -78.6° -131.8°  -53.7°   22.5°  171.2°  124.9°  125.4°   50.2°  -22.1° -102.6°  155.2°   E15                  
H16    -122.4°   42.0° -138.6° -163.0°  -75.0°  135.1°   78.0°  -85.5°  -58.7°  -39.9°  110.6° -109.1°  123.3°  -88.7°   91.2°   H16           
H17     -55.3°  122.2°  -64.6°  -91.7°  158.8°  -93.3°  -51.6°  105.5°   72.2°   91.9° -109.8°  -53.4° -139.3°   88.6°  -66.7°  -96.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2q31b2 :   (ILE151)  (MET355)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1mdub2 :   (GLY152)  (TRP358)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Chicken (Gallus gallus) [TaxId: 9031]
 d3w3da2 :   (ILE150)  (MET354)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
 d2a3za2 :   (GLY150)  (GLU364)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2a40a2 :   (GLY150)  (GLU364)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1deja2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d3a5lc2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d1yaga2 :   (ILE151)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1eqya2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1jcfa2 :   (SER147)  (LEU332)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Prokaryotic actin homolog MreB |Thermotoga maritima [TaxId: 2336]
 d1lcua2 :   (GLY160)  (GLU374)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1m8q0_ :   (GLY150)  (TRP356)   [view usage] : i.15.1.1 |Muscle protein complexes |Muscle protein complexes |Muscle protein complexes |Averaged rigor crossbridges from tomograms of insect flight muscle |Chicken (Gallus gallus) and Rabbit (Oryctolagus cuniculus) [TaxId: 9031]
 d1hlua2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Cow (Bos taurus) [TaxId: 9913]
 d4cbua2 :   (GLY151)  (LEU350)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d1c0fa2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d2hf3a2 :   (GLY150)  (LEU349)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1atna2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4cbxa2 :   (GLY150)  (TRP357)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Plasmodium berghei [TaxId: 5821]
 d1c0ga2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d1nlva2 :   (GLY150)  (GLN354)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d1ma9b2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1d4xa2 :   (GLY150)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d4m63d2 :   (GLY150)  (LEU349)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1yvna2 :   (ILE151)  (TRP356)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Actin |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4jhdb2 :   (GLY150)  (GLU364)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Fruit fly (Drosophila melanogaster) [TaxId: 7227]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55,    i.15