Protein Concepts Dictionary

Tableau information

Concept source:  d1z9aa_  amino acid (a.a.) range (PRO6)(THR236)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEEHEHEHEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO6)   (SER11) E1
	   (HIS14)   (ILE19) E2
	   (ILE19)   (LYS25) E3
	   (ALA31)   (GLY42) H4
	   (ARG44)   (GLY48) E5
	   (ASN54)   (GLY69) H6
	   (ILE76)   (LEU82) E7
	   (ASP88)  (LYS104) H8
	  (ASP109)  (ILE113) E9
	  (ILE147)  (GLY161) H10
	  (LYS164)  (ASN170) E11
	  (GLY173)  (GLY182) H12
	  (ALA188)  (GLU193) E13
	  (PRO201)  (GLY211) H14
	  (THR213)  (SER218) E15
	  (GLN223)  (ASN229) H16
	  (GLN230)  (THR236) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      144.6°   E2                                                                                                              
E3       81.3°  -75.6°   E3                                                                                                       
H4     -104.0°   97.9°  173.4°   H4                                                                                                
E5       58.6°  -89.5°  -29.8°  151.5°   E5                                                                                         
H6     -115.1°   99.9°  137.7°  -43.6° -161.1°   H6                                                                                  
E7       51.1°  -94.2°  -44.1°  137.0°  -14.5° -165.6°   E7                                                                           
H8     -151.9°   61.1°  102.5°  -74.7°  131.8°  -45.0°  145.0°   H8                                                                    
E9       62.5°  -82.1°  -51.4°  127.4°  -26.4°  170.9°  -16.9°  140.6°   E9                                                             
H10    -107.6°  107.1°  120.0°  -62.5°  140.9°  -20.2°  149.4°  -46.2°  166.3°   H10                                                     
E11      95.2°  -50.1°  -61.2°  113.9°  -52.2°  144.6°  -49.3°  111.1°  -33.8°  157.1°   E11                                              
H12     -54.1°  160.2°  109.0°  -77.5°  103.8°  -63.3°  102.3°  -99.3°  116.2°  -53.6°  149.3°   H12                                       
E13     122.8°   22.7°  -56.5°  116.9°  -66.8°  122.0°  -71.8°   80.1°  -61.1°  125.8°  -33.0°  164.5°   E13                                
H14      68.4° -147.0°  123.0°  -63.2°  120.4°  -47.4°  118.3°  -87.0°  130.9°  -40.9°  160.8°   16.6° -166.2°   H14                         
E15    -125.8°   27.7°  -48.3°  125.3°  -67.2°  115.9°  -76.1°   71.1°  -69.7°  113.8°  -47.7°  148.7°  -17.1°  150.7°   E15                  
H16     -94.6°   67.1°  -14.8°  161.2°  -44.3°  125.2°  -58.5°   87.8°  -63.8°  109.7°  -65.9°  112.7°  -51.9°  123.5°   39.5°   H16           
H17     137.1°  -52.2° -127.2°   46.2°  129.8°   67.8°  124.2°  -61.7°  107.4°  -86.3°   77.6° -122.7°   70.8° -107.0°  -79.9° -119.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ye4a_ :     (PRO6)  (THR236)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Xylose reductase |Fungus (Candida tenuis) [TaxId: 45596]
 d1q13a_ :     (GLN6)  (HIS248)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |20alpha-hydroxysteroid dehydrogenase |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d1z9aa_ :     (PRO6)  (THR236)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Xylose reductase |Fungus (Candida tenuis) [TaxId: 45596]
 d2ipja_ :     (GLN6)  (HIS248)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |3-alpha-hydroxysteroid dehydrogenase |Human (Homo sapiens), type III [TaxId: 9606]
 d1r38a_ :     (PRO6)  (THR236)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Xylose reductase |Fungus (Candida tenuis) [TaxId: 45596]
 d3fjnb_ :     (HIS6)  (TYR248)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1sm9a_ :     (PRO6)  (THR236)   [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |Xylose reductase |Fungus (Candida tenuis) [TaxId: 45596]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1