Tableau information
Concept source: d3pdqb_ amino acid (a.a.) range (THR173)(GLY335)
nSSEs in this Concept: 17
String of secondary struct.elems. (SSEs) defining this concept: EEEEHHHEHEEEEEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(THR173) (GLY179) E1
(THR183) (HIS188) E2
(LEU194) (LEU200) E3
(GLU204) (SER210) E4
(LYS217) (PHE226) H5
(PRO228) (CYS234) H6
(ALA236) (LYS241) H7
(MET242) (SER246) E8
(SER246) (GLY254) H9
(ASP258) (ALA264) E10
(GLY265) (PHE271) E11
(HIS276) (GLY282) E12
(ASN284) (SER288) E13
(THR289) (ARG294) E14
(TRP296) (GLN302) H15
(MET317) (GLN325) H16
(TYR329) (GLY335) H17
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -130.9° E2
E3 -47.4° -162.8° E3
E4 112.6° -18.6° -154.8° E4
H5 57.8° -107.6° 85.6° 95.1° H5
H6 163.4° -62.1° 124.1° -79.2° -111.2° H6
H7 67.4° -159.8° 22.6° -174.5° 89.5° 102.0° H7
E8 -53.7° 94.0° -71.7° 83.7° 103.9° -142.0° -92.3° E8
H9 -108.3° 26.0° -139.8° 18.7° 108.6° -86.6° -155.9° 68.4° H9
E10 -92.5° 136.6° -48.3° 154.9° -98.0° 76.2° -25.9° -113.5° 152.2° E10
E11 118.8° 22.6° 166.2° 18.3° -85.0° -68.9° -166.6° 100.9° 36.6° -143.4° E11
E12 -53.4° 174.2° 15.0° 166.0° 77.9° 114.6° 14.7° -86.2° -154.6° -39.1° -162.7° E12
E13 159.5° 29.1° 152.2° -47.0° -115.5° -33.3° -133.0° 116.7° 53.4° 107.9° -41.5° -147.0° E13
E14 -131.4° -25.0° 139.0° -36.7° -131.5° -65.0° 139.0° 81.1° -27.9° 124.7° -47.3° 150.0° 35.7° E14
H15 81.1° 81.7° 112.6° 72.2° -27.2° -92.1° -113.0° 114.5° 88.8° -113.0° 59.2° -103.5° -88.8° -106.4° H15
H16 -120.1° -57.8° 106.7° -67.4° -160.7° -74.7° 107.7° -67.4° -52.5° 101.3° -80.0° 117.3° 59.0° -32.8° -139.1° H16
H17 61.0° 97.4° -94.7° 84.2° -11.1° -110.8° -100.3° 100.8° 97.5° -108.9° 75.0° -88.2° -108.6° 120.7° -20.3° 149.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2vd7a_ : (THR173) (GLY335) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d2oq7a_ : (THR173) (GLY335) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d2xmla_ : (THR175) (GLY337) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2vd7b_ : (THR173) (GLY335) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d3rvha_ : (THR173) (GLY335) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d2wwja_ : (THR173) (GLY335) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d3pdqb_ : (THR173) (GLY335) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d3pdqa_ : (THR173) (GLY335) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
d3rvhb_ : (THR173) (GLY335) [view usage] : b.82.2.14 |Double-stranded beta-helix |Clavaminate synthase-like |Histone demethylase core |JMJD2A core |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82