Protein Concepts Dictionary

Tableau information

Concept source:  d1ko3a_  amino acid (a.a.) range (GLU41)(ASN295)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHEHEEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU41)   (GLN47) E1
	   (GLY51)   (ASP62) E2
	   (TYR67)   (GLY77) E3
	   (ASP78)   (ASP84) E4
	   (ALA89)  (LYS102) H5
	  (THR110)  (HIS116) E6
	  (VAL125)  (GLY133) H7
	  (GLY133)  (SER139) E8
	  (SER139)  (GLY150) H9
	  (THR169)  (GLY174) E10
	  (GLY179)  (ARG183) E11
	  (PRO186)  (PRO192) E12
	  (ASP199)  (VAL205) E13
	  (SER215)  (CYS221) E14
	  (ASP238)  (TYR253) H15
	  (GLN257)  (GLY262) E16
	  (GLY279)  (ASN295) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      150.4°   E2                                                                                                              
E3      -49.9°  156.2°   E3                                                                                                       
E4      120.8°  -30.3°  153.9°   E4                                                                                                
H5      -46.8°  153.0°  -40.4°  156.8°   H5                                                                                         
E6      101.2°  -49.6°  141.6°  -19.7°  140.7°   E6                                                                                  
H7      -74.7°  134.4°  -26.9° -157.1°  -46.1° -163.2°   H7                                                                           
E8       74.5°  -78.4°  110.6°  -48.3°  120.6°  -31.1° -135.3°   E8                                                                    
H9      169.5°   21.7° -140.2°   52.0° -136.1°   71.2° -114.6°   99.8°   H9                                                             
E10      34.4° -117.3°   77.9°  -87.0°   80.6°  -67.7°  104.7°  -40.2° -138.9°   E10                                                     
E11     -87.3°  121.5°  -47.9°  151.8°  -44.9° -170.5°   24.4°  158.4°  -99.8°  121.2°   E11                                              
E12     105.7°  -47.6° -135.4°   19.1°  150.7°   14.8° -149.9°  -31.2°   68.8°  -71.4°  163.7°   E12                                       
E13     -48.6° -145.0°   50.8° -147.2°   10.6° -133.5°   55.6°  118.8° -131.9°   80.2°  -50.4°  145.9°   E13                                
E14     150.4°   15.1° -142.8°  -32.8°  162.6°  -52.1° -126.6°  -76.1°   26.7° -116.3°  120.6°  -45.1°  158.1°   E14                         
H15     -37.0° -163.9°   33.9° -154.7°  -11.2° -135.7°   46.7°  111.5° -147.0°   71.3°  -51.5°  142.6°  -18.9°  172.1°   H15                  
E16    -167.0°   28.8° -127.8°  -54.5°  142.4°  -73.9°  106.4°  -97.0°  -19.1° -136.7°   98.8°  -66.6°  142.8°  -21.9°  150.3°   E16           
H17    -128.7°   27.5° -143.8°   16.2°  172.8°  -32.3° -140.9°  -54.3°   46.9°  -94.5°  141.7°  -23.3°  163.3°   21.9° -165.7°   43.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4d1va_ :    (GLU41)  (VAL290)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1a8ta_ :    (ASP10)  (SER230)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
 d4wd6a_ :     (GLU6)  (THR218)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas stutzeri [TaxId: 316]
 d2ynua_ :    (PRO41)  (SER294)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4pvob_ :    (GLY40)  (ARG296)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1hlka_ :    (ASP27)  (SER247)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
 d1a8tb_ :    (ASP10)  (SER230)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Bacteroides fragilis [TaxId: 817]
 d1ko3a_ :    (GLU41)  (ASN295)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Pseudomonas aeruginosa, VIM-2 [TaxId: 287]
 d4d1ua_ :    (GLY40)  (LYS291)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4ua4b_ :    (GLY40)  (ASN259)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4d1ta_ :    (GLU41)  (LYS291)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4ua4a_ :    (GLY40)  (HIS257)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4bz3a_ :    (GLY42)  (ARG262)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4pvoa_ :    (GLY40)  (ARG296)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Pseudomonas aeruginosa [TaxId: 287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157