Protein Concepts Dictionary

Tableau information

Concept source:  d4rama_  amino acid (a.a.) range (GLY42)(CYS208)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEHHEHHEHEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY42)   (GLY47) E1
	   (LEU49)   (GLN53) E2
	   (ASN57)   (ASP66) E3
	   (GLY71)   (ASP82) E4
	   (GLY84)   (ASP90) E5
	   (THR94)  (ASN110) H6
	  (ALA114)  (HIS120) E7
	  (HIS122)  (GLY127) H8
	  (ASP130)  (GLY136) H9
	  (ILE137)  (ASN142) E10
	  (ASN142)  (LEU148) H11
	  (LEU148)  (GLY153) H12
	  (GLN158)  (ALA164) E13
	  (GLU170)  (PRO175) H14
	  (PRO179)  (TYR184) E15
	  (ASP192)  (ILE198) E16
	  (ASP202)  (CYS208) E17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      153.4°   E2                                                                                                              
E3      -48.5°  157.7°   E3                                                                                                       
E4      109.9°  -43.5°  157.7°   E4                                                                                                
E5      -79.0°  123.7°  -36.3°  150.8°   E5                                                                                         
H6      123.6°  -38.9°  152.2°  -38.2°  155.1°   H6                                                                                  
E7      -93.4°  108.9°  -50.7°  140.7°  -14.8°  142.2°   E7                                                                           
H8       73.6°  -83.6°  117.4°  -48.1° -152.5°  -50.5° -167.1°   H8                                                                    
H9       81.4°  -72.8°  129.4°  -31.8° -155.7°  -48.8° -161.5°   19.0°   H9                                                             
E10    -114.0°   81.1°  -81.6°  107.8°  -45.7°  119.7°  -33.0°  153.8° -134.8°   E10                                                     
H11     -26.4° -176.9°   23.4° -136.0°   58.4° -138.3°   73.1°  -94.5° -106.0°  101.5°   H11                                              
H12     -63.3°  135.7°   39.3° -144.4°   64.7°  113.4°   74.2°  -99.3° -118.0°  106.5°  -42.1°   H12                                       
E13    -145.7°   47.0° -114.0°   80.7°  -77.7°   85.4°  -63.3°  128.1°  112.3°  -34.3° -135.5°  125.8°   E13                                
H14      57.8° -112.8°   82.2°  -89.6°  117.4°  -74.0°  129.7°   42.9°   61.8° -162.6°   64.3°  -56.4° -156.5°   H14                         
E15     -77.7°  117.9°  -48.2° -131.0°   21.3°  156.8°   24.1° -146.0° -138.4°  -37.3°   64.9°   83.5°  -71.5°  129.1°   E15                  
E16     126.0°  -42.3° -143.2°   49.4° -146.4°   11.2° -135.8°   56.1°   57.9°  119.8° -134.6° -103.9°   86.2°  -71.4°  156.2°   E16           
E17     -45.7°  153.4°   19.2° -143.7°   33.4°  167.7°  -47.7° -119.4° -124.7°  -72.5°   29.4°   58.3° -106.8°   93.7°  -35.6°  161.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3spud_ :    (ASP43)  (GLY207)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d4hl1b_ :    (GLY42)  (CYS208)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d4rama_ :    (GLY42)  (CYS208)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d4hl1a_ :    (GLY42)  (CYS208)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d3srxa_ :    (ASP43)  (CYS208)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d4rbsb_ :    (GLY42)  (CYS208)   [view usage] : d.157.1.0 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157