Protein Concepts Dictionary

Tableau information

Concept source:  d1w8na3  amino acid (a.a.) range (GLY219)(GLY402)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEHEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY219)  (ASN229) E1
	  (GLN235)  (SER241) E2
	  (ARG246)  (ALA250) E3
	  (GLU260)  (GLU265) E4
	  (ARG270)  (ARG276) E5
	  (LYS285)  (THR290) E6
	  (HIS294)  (PRO298) E7
	  (PRO298)  (ASP304) E8
	  (ASN310)  (ARG316) E9
	  (SER325)  (VAL330) H10
	  (VAL330)  (ASN335) E11
	  (THR346)  (CYS351) E12
	  (PRO358)  (GLN364) E13
	  (TYR370)  (ALA375) E14
	  (GLY379)  (TYR385) E15
	  (GLY390)  (ASN395) E16
	  (ASN397)  (GLY402) H17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      148.9°   E2                                                                                                              
E3      -42.3°  160.0°   E3                                                                                                       
E4      153.2°  -50.7°  113.0°   E4                                                                                                
E5      -36.4°  132.4°  -67.1°  161.2°   E5                                                                                         
E6      137.3°  -39.3°  120.9°  -35.5°  161.6°   E6                                                                                  
E7      -54.2°  156.9°  -23.3°  108.0°  -64.1°  130.3°   E7                                                                           
E8      -96.9°  101.4°  -90.0°   92.6°  -68.7°  124.9°   67.1°   E8                                                                    
E9      160.1°  -43.5°  120.5°    7.5°  160.3°  -33.4°  114.8°   92.4°   E9                                                             
H10     -28.7°  128.6°  -68.2°  177.5°  -16.7°  146.1°  -72.2°  -85.2°  171.0°   H10                                                     
E11     -31.8°  127.1°  -70.3°  174.0°  -14.4°  147.7°  -72.9°  -82.3°  168.1°   -3.5°   E11                                              
E12     129.9°  -64.6°   95.9°  -25.2°  163.0°  -31.1°   99.9°  111.9°  -30.6°  157.2°  160.7°   E12                                       
E13     -69.8°   91.9° -107.3°  137.0°  -40.5°  126.7° -102.9°  -72.7°  129.9°  -41.1°  -38.3°  156.5°   E13                                
E14     168.9°  -37.5°  128.2°   15.8°  153.3°  -36.9°  119.8°   88.1°    8.8°  162.4°  159.4°  -39.2°  121.2°   E14                         
E15     -21.7°  129.3°  -63.9°  169.0°  -29.2°  135.6°  -73.4°  -97.9°  168.9°  -13.4°  -16.9°  144.3°  -50.7°  166.8°   E15                  
E16     148.0°  -61.9°  105.9°  -17.5°  144.1°  -53.0°   95.2°   76.3°  -21.3°  160.7°  158.4°  -36.9°  134.0°  -24.6°  168.6°   E16           
H17      55.0° -156.1°  -26.0° -108.5°   62.7° -132.3°   -3.0°   64.2° -115.1°   71.6°   72.2° -101.6°  101.0° -119.6°   73.5°   95.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1wcqc3 :   (ARG220)  (GLY402)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
 d1eura_ :   (GLY219)  (GLY402)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Micromonospora sialidase, N-terminal domain |Micromonospora viridifaciens [TaxId: 1881]
 d1w8na3 :   (GLY219)  (GLY402)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |Micromonospora sialidase, N-terminal domain |Micromonospora viridifaciens [TaxId: 1881]
 d2bzda1 :   (LEU221)  (GLY402)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
 d1wcqa3 :   (GLY219)  (GLY402)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]
 d2bzdc1 :   (GLY219)  (GLY402)   [view usage] : b.68.1.1 |6-bladed beta-propeller |Sialidases |Sialidases (neuraminidases) |automated matches |Micromonospora viridifaciens [TaxId: 1881]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.68