Protein Concepts Dictionary

Tableau information

Concept source:  d3n35a_  amino acid (a.a.) range (GLU2)(GLU196)

nSSEs in this Concept: 17

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLU2)   (GLU10) E1
	   (ASN17)   (GLY22) E2
	   (GLY22)   (GLN28) E3
	   (GLY30)   (THR35) E4
	   (THR35)   (GLN39) E5
	   (MET42)   (ASP46) E6
	   (ASP46)   (LEU52) E7
	   (ALA54)   (TRP60) E8
	   (GLY65)   (PHE74) E9
	   (SER75)   (PRO81) E10
	   (LEU86)   (VAL92) E11
	  (GLN122)  (VAL126) E12
	  (GLY144)  (ASN148) E13
	  (ILE153)  (GLN159) E14
	  (GLN164)  (ALA174) E15
	  (LEU179)  (TYR185) E16
	  (ALA190)  (GLU196) E17

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                                     
E2      -64.0°   E2                                                                                                              
E3       60.4° -124.4°   E3                                                                                                       
E4      -95.3°   31.5°  155.2°   E4                                                                                                
E5       23.5°  -68.8°   61.4°  -98.8°   E5                                                                                         
E6      141.2°   79.1° -154.8°  -49.7°  131.3°   E6                                                                                  
E7      128.4°  167.1°  -68.2° -136.3°  120.7°  -88.0°   E7                                                                           
E8     -139.4° -106.6°  113.5°  -80.7°  162.8°  -60.8°   66.9°   E8                                                                    
E9       -7.7°  -70.6°   53.9° -101.5°   27.7° -148.7°  122.1° -135.3°   E9                                                             
E10      45.4°  -18.6°  105.8°  -49.9°   52.8°  -97.5°  173.5° -118.9°  -52.0°   E10                                                     
E11     139.0°  154.0°  -80.2°  124.7° -126.3°   75.4°  -13.4°   65.0°  133.6°  169.3°   E11                                              
E12     -41.1°  -88.9°   46.3° -112.3°   60.9° -155.3°  103.4°  103.2°  -34.2°  -72.9°  116.8°   E12                                       
E13     135.3°   90.8° -131.2°   69.1°  115.0°   28.5°  -77.3°  -81.1°  141.9°  106.0°  -64.0°  175.6°   E13                                
E14     -21.0°  -81.8°   43.5° -111.7°  -37.7° -160.9°  111.1°  126.5°  -13.3°  -63.4°  123.5°   23.3° -152.4°   E14                         
E15    -178.0°  117.2° -118.3°   85.8° -157.9°   40.4°  -50.6°   39.1° -170.4°  135.7°  -40.4°  137.0°  -46.6°  157.1°   E15                  
E16     -12.0°  -74.6°   49.9° -105.4°   30.0° -153.1°  118.1°  133.4°   -4.3°  -56.1°  129.8°  -31.1°  144.9°   -9.1°  166.1°   E16           
E17     157.0°   95.5° -139.3°   65.5°  141.7°   16.4°  -71.6°  -53.5°  164.7°  113.9°  -59.2°  156.6°  -27.8°  177.2°  -24.9°  169.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3n35a_ :     (GLU2)  (GLU196)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |automated matches |Coral tree (Erythrina corallodendron) [TaxId: 3843]
 d1gz9a_ :     (GLU2)  (GLU196)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]
 d1ax0a_ :     (GLU2)  (GLU196)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Coral tree (Erythrina corallodendron) [TaxId: 3843]
 d1sfya_ :     (GLU2)  (ILE197)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Coral tree (Erythrina corallodendron) [TaxId: 3843]
 d1g7yd_ :     (ILE3)  (ARG193)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Horse gram (Dolichos biflorus), different isoforms [TaxId: 3840]
 d1uzza_ :     (GLU2)  (ILE197)   [view usage] : b.29.1.1 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Legume lectins |Legume lectin |Cockspur coral tree (Erythrina crista-galli) [TaxId: 49817]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29