Protein Concepts Dictionary

Tableau information

Concept source:  d3o8ja_  amino acid (a.a.) range (ILE49)(THR317)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE49)   (HIS55) H1
	   (PHE58)   (GLY68) H2
	   (THR72)   (LEU86) H3
	   (PRO90)  (LEU100) H4
	  (HIS105)  (PRO122) H5
	  (THR128)  (ALA141) H6
	  (SER142)  (GLY157) H7
	  (ILE169)  (GLY179) H8
	  (THR183)  (TYR197) H9
	  (ALA204)  (THR215) H10
	  (ASP218)  (ARG231) H11
	  (GLY232)  (ALA238) H12
	  (ALA238)  (ARG248) H13
	  (THR251)  (LYS266) H14
	  (ASP281)  (GLY299) H15
	  (LEU301)  (THR317) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
H2      130.9°   H2                                                                                                       
H3      -71.7°   94.9°   H3                                                                                                
H4     -100.6°  114.8°  -62.4°   H4                                                                                         
H5       84.3°  -49.6°   96.6°  154.8°   H5                                                                                  
H6      -55.3°  157.5°  -65.3°  -47.7°  138.8°   H6                                                                           
H7      -59.8°  125.3°  -31.3°  -46.9°  120.8°   34.0°   H7                                                                    
H8      -58.0°  123.4°  -28.8°  -50.2°  117.1°  -36.6°   -3.7°   H8                                                             
H9      158.5°   28.6°   98.6°   91.2°  -77.6°  138.9°  120.7°  121.0°   H9                                                      
H10      96.1°  -34.9°   81.1°  131.8°  -23.5°  140.6°  110.6°  107.3°  -62.9°   H10                                              
H11     -98.6°  126.9°  -82.3°  -22.5° -176.3°  -43.7°  -59.4°  -63.1°   99.1°  153.1°   H11                                       
H12     -53.4°  133.3° -122.1° -107.8°   95.0°  -69.0°  -97.7°  -98.2°  139.3° -118.3°  -88.5°   H12                                
H13     -73.7°  153.5°  -83.4°  -41.7°  156.9°  -23.4°  -53.1°  -56.4°  125.4°  163.5°  -26.6°  -66.2°   H13                         
H14     152.8°   33.0°   86.4°   82.6°  -82.2°  129.6°  108.2°  108.4°  -12.6°   63.8°   94.2° -151.4°  120.8°   H14                  
H15     -25.6° -152.1°  -66.4°  -76.1°  109.7°  -29.7°  -42.8°  -42.6° -163.5°  118.3°  -73.1°   56.3°  -49.1°  151.0°   H15           
H16    -172.2°   55.5°  113.7°   78.1° -100.2°  120.9°  121.7°  123.9°   28.9°  -90.4°   77.2° -119.5°  100.9°  -35.0° -150.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4g6ba_ :    (PRO72)  (ASP349)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Escherichia coli [TaxId: 562]
 d2h12b_ :   (LYS105)  (ASP358)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Acetobacter aceti [TaxId: 435]
 d3o8jh_ :    (ILE49)  (GLU316)   [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
 d4jada_ :    (PRO72)  (ASP349)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Escherichia coli [TaxId: 562]
 d3tqga_ :    (ARG34)  (LYS302)   [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
 d1ioma_ :    (ILE34)  (LEU302)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Thermus thermophilus [TaxId: 274]
 d1ctsa_ :    (SER70)  (ILE356)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Pig (Sus scrofa) [TaxId: 9823]
 d3o8ja_ :    (ILE49)  (THR317)   [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Salmonella enterica [TaxId: 90371]
 d1aj8b_ :    (VAL37)  (LEU302)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |Citrate synthase |Pyrococcus furiosus [TaxId: 2261]
 d4e6ya_ :    (ILE74)  (SER349)   [view usage] : a.103.1.1 |Citrate synthase |Citrate synthase |Citrate synthase |automated matches |Vibrio vulnificus [TaxId: 216895]
 d3tqgb_ :    (ARG34)  (LYS302)   [view usage] : a.103.1.0 |Citrate synthase |Citrate synthase |automated matches |automated matches |Coxiella burnetii [TaxId: 777]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.103