Protein Concepts Dictionary

Tableau information

Concept source:  d3bgda_  amino acid (a.a.) range (PRO9)(LEU202)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HHHHEHEHEEEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (PRO9)   (LYS15) H1
	   (THR20)   (ARG31) H2
	   (GLN42)   (HIS47) H3
	   (HIS47)   (LYS53) H4
	   (LEU58)   (LEU64) E5
	   (ALA68)   (GLY78) H6
	   (THR80)   (ILE86) E7
	   (SER87)   (ASN99) H8
	  (SER101)  (PRO106) E9
	  (GLY112)  (SER118) E10
	  (SER122)  (CYS128) E11
	  (SER129)  (ASN137) H12
	  (ASP142)  (ARG147) E13
	  (HIS158)  (LEU169) H14
	  (PHE173)  (ASP183) E15
	  (SER196)  (LEU202) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
H2       81.1°   H2                                                                                                       
H3     -116.8°  -97.6°   H3                                                                                                
H4      -85.8° -128.1°   46.3°   H4                                                                                         
E5       71.9°   93.2°  167.0°  129.4°   E5                                                                                  
H6      -96.1°  -85.7°  -22.5°  -46.1° -167.9°   H6                                                                           
E7       66.0° -101.5°  160.8°  118.1°  -11.5° -158.9°   E7                                                                    
H8      104.4°   40.4°  -57.7°  -97.2°  131.7°  -51.1°  141.4°   H8                                                             
E9      -71.8° -149.8°  106.1°   63.7°  -66.3°  109.6°  -55.6°  160.4°   E9                                                      
E10     113.6°   47.9°  -52.3°  -95.1°  135.3°  -50.0°  146.1°    9.6°  158.3°   E10                                              
E11     -71.0° -121.4°  140.9°  100.5°  -29.6°  146.0°  -19.9° -161.3°  -36.9°  164.0°   E11                                       
H12     -79.6° -102.4°  -38.5°  -25.7°  144.8°  -25.7°  133.9°  -74.7°   85.7°  -75.1°  120.8°   H12                                
E13      86.1°   68.8°  152.1°  159.5°  -30.2°  153.9°  -41.6°  103.1°  -95.8°  105.4°  -59.0°  164.4°   E13                         
H14      94.7°  -79.5°  -26.5°  -51.8°  165.7°   -6.2°  160.0°  -45.6°  115.0°  -45.2°  150.7°   29.9°  147.9°   H14                  
E15      95.3°   83.3°  147.8°  148.1°  -27.2°  162.8°  -37.8°  113.3°  -86.3°  113.3°  -50.8° -171.5°   16.0°  158.5°   E15           
H16     -72.7° -124.6°  -56.6°  -13.1°  121.7°  -51.1°  110.3° -101.0°   59.4° -101.0°   94.9°  -26.3°  151.2°  -55.9°  145.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3bgda_ :     (PRO9)  (LEU202)   [view usage] : c.66.1.36 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Thiopurine S-methyltransferase |Thiopurine S-methyltransferase |Mouse (Mus musculus) [TaxId: 10090]
 d2h11a_ :    (GLU17)  (LEU207)   [view usage] : c.66.1.36 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Thiopurine S-methyltransferase |Thiopurine S-methyltransferase |Human (Homo sapiens) [TaxId: 9606]
 d2gb4b_ :    (ALA11)  (LEU202)   [view usage] : c.66.1.36 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Thiopurine S-methyltransferase |Thiopurine S-methyltransferase |Mouse (Mus musculus) [TaxId: 10090]
 d2gb4a_ :    (ASP10)  (LEU202)   [view usage] : c.66.1.36 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Thiopurine S-methyltransferase |Thiopurine S-methyltransferase |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.66