Protein Concepts Dictionary

Tableau information

Concept source:  d3n81a_  amino acid (a.a.) range (ASP80)(GLU268)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HHHHEEEHHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP80)   (ASP98) H1
	   (ARG99)  (GLY111) H2
	  (PRO113)  (TYR118) H3
	  (ASP121)  (TYR139) H4
	  (TYR139)  (PRO145) E5
	  (PHE150)  (HIS156) E6
	  (CYS162)  (TRP168) E7
	  (LEU172)  (LYS178) H8
	  (GLY180)  (GLY186) H9
	  (GLY186)  (ALA194) E10
	  (LEU199)  (ALA211) H11
	  (VAL217)  (GLY223) E12
	  (PHE224)  (SER234) H13
	  (ASP239)  (GLY245) E14
	  (ILE249)  (SER260) H15
	  (ARG264)  (GLU268) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
H2      -73.2°   H2                                                                                                       
H3     -150.6°  136.2°   H3                                                                                                
H4     -171.0°  115.1°  -21.3°   H4                                                                                         
E5     -157.9°  -96.4°   43.1°   29.3°   E5                                                                                  
E6       14.8°   72.2° -149.1° -160.9°  167.8°   E6                                                                           
E7      -20.2°  -67.7°  150.5°  164.1°  137.7°  -34.1°   E7                                                                    
H8     -172.7°  114.0°   22.1°    3.5°  -26.0° -164.4°  160.8°   H8                                                             
H9      147.0°  130.9°  -20.0°  -24.5°  -53.6° -137.6° -160.8°   27.7°   H9                                                      
E10     -31.3°   42.1° -177.3°  156.5°  136.3°  -31.6°  -32.1°  156.0° -157.8°   E10                                              
H11     128.9° -153.5°  -24.3°  -42.1°  -67.4°  124.8°  138.3°  -44.2°  -22.7° -155.9°   H11                                       
E12     -45.2°   28.8°  163.7°  142.4°  124.8°  -43.5°  -44.8°  142.0°  149.5°  -14.1° -160.9°   E12                                
H13    -169.4° -116.1°   20.5°    8.2°  -24.1°  167.6° -156.0°    5.2°   30.0° -158.1°   44.0°  144.6°   H13                         
E14     -29.0°  -64.8°  147.9°  156.4°  128.9°  -42.5°   -8.8°  152.9°  164.0°  -34.7°  141.7°  -45.5° -148.4°   E14                  
H15     149.1°  104.0°  -42.2°  -28.8°  -51.5°  134.4°  166.5°  -31.8°  -27.4°  135.1°  -49.6°  123.4°  -36.9°  168.6°   H15           
E16     -29.9°  -77.4°  137.3°  151.6°  129.7°  -44.7°  -13.6°  148.7°  151.4°  -45.4°  129.1°  -57.4°  143.6°  -12.7°  178.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3n81a_ :    (ASP80)  (GLU268)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d1nzwa_ :    (ASP80)  (GLY270)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4o5ha_ :    (LYS82)  (LEU285)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d1bxsa_ :    (ASP80)  (GLU268)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Sheep (Ovis aries) [TaxId: 9940]
 d2onna_ :    (ALA81)  (GLU268)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d4wj9a_ :    (SER83)  (GLU269)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4o5hc_ :    (LYS82)  (LEU285)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d3inlb_ :    (ALA81)  (SER279)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d1o01c_ :    (ALA81)  (GLU268)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d2wmea_ :    (THR64)  (LEU253)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4wb9a_ :    (SER83)  (GLY271)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82