Protein Concepts Dictionary

Tableau information

Concept source:  d2pfkd_  amino acid (a.a.) range (PHE73)(ASP295)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEHEHEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PHE73)   (ASP78) H1
	   (ASP78)   (GLY93) H2
	   (ASP95)  (GLY101) E3
	  (GLY102)  (GLY116) H4
	  (PRO118)  (PRO123) E5
	  (GLY138)  (HIS160) H6
	  (ARG162)  (VAL168) E7
	  (GLY174)  (GLY185) H8
	  (GLU187)  (VAL191) E9
	  (SER197)  (LYS211) H10
	  (LYS214)  (ILE220) E11
	  (VAL227)  (GLU237) H12
	  (GLU241)  (HIS249) E13
	  (PRO258)  (GLY278) H14
	  (GLY281)  (ILE286) E15
	  (GLN290)  (ASP295) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
H2      -95.6°   H2                                                                                                       
E3     -131.1°  126.0°   E3                                                                                                
H4       36.6°  -65.1° -167.6°   H4                                                                                         
E5     -140.3°  112.2°  -13.9° -172.0°   E5                                                                                  
H6     -142.2°  118.6°  -11.8°  174.7°  -12.9°   H6                                                                           
E7       38.7°  -68.9° -165.1°    8.1° -178.9°  166.7°   E7                                                                    
H8      140.6°   76.3°  -50.9°  137.4°  -37.3°  -47.7°  143.7°   H8                                                             
E9      -36.7°  -97.0°  136.1°  -35.6°  149.8°  139.3°  -29.3° -172.9°   E9                                                      
H10     138.7°   70.6°  -56.6°  131.9°  -42.9°  -53.1°  138.0°   -5.7°  167.3°   H10                                              
E11     -34.1°  -85.5°  148.2°  -23.3°  162.0°  151.5°  -17.0°  160.6°  -12.3°  155.0°   E11                                       
H12     118.7° -117.3°  -23.8°  150.6°  -22.8°  -32.6°  156.5°  -43.3°  142.1°  -48.4°  149.7°   H12                                
E13      59.0°   48.2°  169.6°  -22.4°  158.8°  157.8°  -22.3°  124.5°  -48.8°  118.9°  -37.6°  161.1°   E13                         
H14      24.0°  -78.7°  153.6°  -14.0°  164.3°  162.7°  -14.7°  146.7°  -26.9°  141.9°  -16.8°  142.3°  -35.8°   H14                  
E15    -132.4°   82.9°  -47.2°  138.5°  -34.7°  -46.8°  146.0°   10.9° -169.1°   14.4° -160.8°  -34.8°  130.4°  144.2°   E15           
E16     -51.4° -118.6°  112.4°  -59.9°  125.8°  115.0°  -53.4°  162.7°   24.3° -167.8°  -36.6°  123.9°  -71.0°  -50.3°  158.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2pfka_ :    (PHE73)  (ASP295)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Escherichia coli [TaxId: 562]
 d2pfkc_ :    (PHE73)  (ASP295)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Escherichia coli [TaxId: 562]
 d1mtoa_ :    (PRO74)  (ASP295)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
 d3pfka_ :    (GLU53)  (ASP295)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
 d3u39b_ :    (CYS73)  (ASP295)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
 d2pfkd_ :    (PHE73)  (ASP295)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Escherichia coli [TaxId: 562]
 d1zxxa_ :    (PRO74)  (ASP295)   [view usage] : c.89.1.0 |Phosphofructokinase |Phosphofructokinase |automated matches |automated matches |Lactobacillus delbrueckii [TaxId: 1585]
 d3u39a_ :    (CYS73)  (ILE296)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Bacillus stearothermophilus [TaxId: 1422]
 d1pfka_ :    (PHE73)  (ASP295)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |ATP-dependent phosphofructokinase |Escherichia coli [TaxId: 562]
 d4a3sa_ :    (LEU54)  (ILE296)   [view usage] : c.89.1.1 |Phosphofructokinase |Phosphofructokinase |Phosphofructokinase |automated matches |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.89