Protein Concepts Dictionary

Tableau information

Concept source:  d3r3uc_  amino acid (a.a.) range (THR84)(SER269)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHHHHHHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR84)  (GLY100) H1
	  (ALA105)  (ASP110) E2
	  (ASP110)  (ASP122) H3
	  (SER123)  (SER128) H4
	  (SER128)  (ASP134) E5
	  (TYR139)  (MET145) H6
	  (ASN146)  (LYS152) H7
	  (HIS155)  (GLN161) H8
	  (PRO164)  (PRO174) H9
	  (PRO174)  (THR186) H10
	  (ASP195)  (PHE206) H11
	  (ASP208)  (TYR224) H12
	  (ALA225)  (GLY237) H13
	  (PRO243)  (GLY249) E14
	  (GLY252)  (ALA258) H15
	  (PRO260)  (SER269) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2      142.8°   E2                                                                                                       
H3      -81.5° -133.4°   H3                                                                                                
H4       48.6° -109.4° -114.3°   H4                                                                                         
E5      133.5°  -17.1° -144.8°   93.2°   E5                                                                                  
H6      158.4°  -24.0° -118.5° -111.3°  -26.5°   H6                                                                           
H7       47.6°  -96.7° -118.7°   60.0°   93.6° -119.1°   H7                                                                    
H8       86.5°   87.0°  -81.5°  124.9°  101.2° -103.8°  -66.1°   H8                                                             
H9      -67.3°   80.9° -145.3°   32.1°   67.0°   91.1°  -48.0° -110.2°   H9                                                      
H10     -88.5°  111.8°   72.2°  -67.6°  101.0°   90.1° -126.1° -153.7°   91.4°   H10                                              
H11     117.4°  -70.8°   75.1°  157.5°  -87.9°  -78.3°  -97.5°   33.6° -132.3°  134.3°   H11                                       
H12    -118.2°  -98.1°   47.7° -116.4° -101.2°  -75.9°  165.0° -112.4°  137.3°   49.0°  -85.3°   H12                                
H13     -92.4° -120.4°   45.7°  -90.7° -116.8°  -96.4°  139.6° -126.5°  118.4°  -28.1°  108.9°  -28.5°   H13                         
E14     117.4°  -30.4° -160.5°   79.0°  -16.1°  -42.1°   79.9°  103.0°   51.2°  102.3°  -98.0° -114.4° -124.1°   E14                  
H15    -141.6°   74.8°  -66.6° -126.7°   79.6°   53.4°  170.4° -108.3°  132.7°   62.4°  -75.6°  -23.4°  -50.0°  -94.2°   H15           
H16     -67.3°  135.0°   29.2° -113.2°  152.1°  134.2°  -92.2°  -56.9° -133.4°  -97.5°   64.3°   75.7°   73.5°  159.7°   90.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3r3uc_ :    (THR84)  (SER269)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
 d3b12a_ :    (SER78)  (PHE249)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Burkholderia sp. [TaxId: 36773]
 d3r41b_ :    (THR84)  (ALA268)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
 d3r41a_ :    (THR84)  (SER269)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
 d3r3ua_ :    (THR84)  (SER269)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
 d3r3ud_ :    (THR84)  (ALA258)   [view usage] : c.69.1.0 |alpha/beta-Hydrolases |alpha/beta-Hydrolases |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.69