Protein Concepts Dictionary

Tableau information

Concept source:  d1m1na_  amino acid (a.a.) range (ALA63)(THR265)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHEHHEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA63)   (VAL71) H1
	   (ASP77)   (HIS83) E2
	   (GLY87)   (ARG93) H3
	  (THR103)  (ALA108) H4
	  (THR111)  (SER116) E5
	  (GLY127)  (PRO143) H6
	  (GLY147)  (SER152) E7
	  (PRO155)  (GLY160) H8
	  (ILE163)  (LEU174) H9
	  (LYS176)  (ARG182) E10
	  (LEU193)  (ASP204) H11
	  (GLY208)  (THR214) H12
	  (ASP222)  (GLY227) E13
	  (ASP234)  (GLY246) H14
	  (VAL250)  (SER254) E15
	  (ILE259)  (THR265) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2     -163.7°   E2                                                                                                       
H3      -46.8°  137.8°   H3                                                                                                
H4      102.2°  -85.9°  125.3°   H4                                                                                         
E5      129.4°  -46.0°  176.1°  -52.9°   E5                                                                                  
H6      -15.7°  154.1°  -36.6° -117.6°  140.0°   H6                                                                           
E7     -163.8°  -20.9°  119.2°  -93.1°  -64.7°  148.3°   E7                                                                    
H8      120.5°   61.3° -155.8°  -30.6°   22.3° -135.3°  -75.5°   H8                                                             
H9      -21.5°  147.4°  -68.2°  -90.3°  108.1°  -33.9°  166.9°  101.7°   H9                                                      
E10     151.3°  -39.1°  104.6°   93.9°  -79.2°  139.3°  -18.6°  -84.8° -172.7°   E10                                              
H11     -52.8°  125.4°  -96.7°   56.3°   79.5°  -67.7°  143.1°   67.8°  -35.2°  150.0°   H11                                       
H12      36.8°  152.8°  -66.4°   67.1°  110.1°  -51.2°  154.4°   92.1°  -36.8°  140.9°  -35.5°   H12                                
E13     142.5°  -29.1°  110.9° -114.4°  -72.6°  127.7°  -25.1°  -90.2°  144.4°  -37.3°  147.6° -176.9°   E13                         
H14     -49.2°  145.6°  -61.4°   65.0°  116.0°  -60.2°  137.1°  -94.6°  -55.4°  121.4°  -52.5°  -19.9°  157.7°   H14                  
E15     143.5°  -24.1°  119.4° -109.6°  -63.9°  130.4°  -28.3°  -83.0°  139.3°  -44.0°  137.4°  172.9°  -10.2°  165.2°   E15           
H16      96.5°   98.8°   91.5°  -41.3°  -88.3° -106.1°   91.5°  -67.8°  -99.4°   80.0°  -78.4°  -63.0° -116.1°   47.3° -119.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1h1la_ :    (CYS61)  (ASN262)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Klebsiella pneumoniae [TaxId: 573]
 d4nd8a_ :    (CYS62)  (THR265)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |automated matches |Azotobacter vinelandii [TaxId: 354]
 d1g20a_ :    (CYS62)  (THR265)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Azotobacter vinelandii [TaxId: 354]
 d1m1na_ :    (ALA63)  (THR265)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Azotobacter vinelandii [TaxId: 354]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.92