Protein Concepts Dictionary

Tableau information

Concept source:  d2fw2c_  amino acid (a.a.) range (GLU32)(LYS222)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEHHEEHEEHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU32)   (ASP47) H1
	   (LYS50)   (ALA56) E2
	   (ASP66)   (ASP77) H3
	   (ALA81)   (PHE99) H4
	  (PRO102)  (ASN108) E5
	  (GLY109)  (GLY113) E6
	  (GLY113)  (ASP123) H7
	  (ASP123)  (ASN128) E8
	  (ALA131)  (TYR137) E9
	  (ILE150)  (MET156) H10
	  (LYS158)  (GLY168) H11
	  (GLY168)  (THR172) E12
	  (THR172)  (LYS179) H13
	  (SER183)  (LEU187) E14
	  (THR192)  (SER204) H15
	  (ASN206)  (LYS222) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2      157.5°   E2                                                                                                       
H3     -116.3°   85.9°   H3                                                                                                
H4       23.1° -136.4°  136.8°   H4                                                                                         
E5      135.9°  -21.7° -107.5° -115.4°   E5                                                                                  
E6     -109.5°   92.2°  -24.0° -123.2° -112.8°   E6                                                                           
H7      -12.1° -163.8°  108.8°  -28.1° -143.4°  -98.7°   H7                                                                    
E8      118.3°  -39.2° -124.0°   99.2°  -18.0° -130.7° -127.1°   E8                                                             
E9     -122.2°   80.0°  -17.5° -137.0°  101.2°  -13.8° -112.0°  119.1°   E9                                                      
H10      63.4° -100.9° -144.3°   41.4°  -84.4° -120.4°   63.2°  -74.5° -129.0°   H10                                              
H11     142.6°   40.4°  -68.3°  146.7°   52.2°  -87.8° -151.3°   61.6°  -74.3°  135.9°   H11                                       
E12      51.2° -106.5°  160.9°   36.4°  -85.1°  159.5°   61.3°  -67.3°  173.2°   48.9° -111.8°   E12                                
H13     -55.3°  143.0°   71.2°  -67.8°  154.0°   55.7°  -43.6° -156.8°   69.4°   83.7° -138.7°  103.9°   H13                         
E14     104.3°  -54.4° -132.2°   89.1°  -35.1° -146.2°  114.9°  -18.8° -133.0°  -75.9°   64.1°  -53.7° -156.5°   E14                  
H15     -37.7°  164.8°  -79.1°   58.1°  173.5°   73.1°   30.1°  155.9°  -85.0°   90.1° -132.6°   88.6°   27.3°  139.7°   H15           
H16    -129.2°   67.5°  -47.7°  129.4°   84.6°  -33.0°  117.1°  101.3°  -30.4°  102.5°  -83.0°  150.4°   75.6° -119.7°  100.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3mybb_ :    (SER30)  (THR220)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
 d2ppyb_ :    (LEU34)  (MSE225)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Geobacillus kaustophilus [TaxId: 235909]
 d3q1td_ :    (TRP51)  (GLY234)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
 d1wz8a1 :    (PRO35)  (LEU229)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Probable enoyl-CoA hydratase TTHA0218 |Thermus thermophilus [TaxId: 274]
 d3kqfa_ :    (SER31)  (ALA215)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d2vx2f_ :    (ASP85)  (GLN261)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2fbmb_ :   (ASN310)  (SER484)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Chromodomain protein CDY1, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3q1tf_ :    (TRP51)  (GLY234)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
 d3i47a_ :    (ASP29)  (TYR217)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
 d2fw2a1 :    (ASN30)  (LYS222)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Chromodomain protein CDY2A |Human (Homo sapiens) [TaxId: 9606]
 d1hzdb_ :   (SER104)  (VAL299)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |AUH protein |Human (Homo sapiens) [TaxId: 9606]
 d2fw2f_ :    (ASN30)  (SER242)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Chromodomain protein CDY2A |Human (Homo sapiens) [TaxId: 9606]
 d1hzda_ :   (SER104)  (VAL299)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |AUH protein |Human (Homo sapiens) [TaxId: 9606]
 d2fw2c_ :    (GLU32)  (LYS222)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Chromodomain protein CDY2A |Human (Homo sapiens) [TaxId: 9606]
 d2vx2b_ :    (ASP85)  (GLN261)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14