Protein Concepts Dictionary

Tableau information

Concept source:  d2qw8a_  amino acid (a.a.) range (THR45)(GLY269)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR45)   (GLY55) H1
	   (ILE57)   (GLY61) E2
	   (HIS66)   (VAL76) H3
	   (ASP77)   (SER81) E4
	   (GLN91)  (GLY102) H5
	  (LYS105)  (SER110) E6
	  (PRO123)  (ASN143) H7
	  (PRO145)  (ALA151) E8
	  (ALA155)  (PRO168) H9
	  (ASP170)  (TYR175) E10
	  (TYR186)  (ALA198) H11
	  (ARG206)  (TYR210) E12
	  (THR218)  (ILE230) H13
	  (GLY231)  (VAL239) E14
	  (GLU241)  (LEU251) H15
	  (GLU253)  (GLY269) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2      144.0°   E2                                                                                                       
H3       28.0° -159.7°   H3                                                                                                
E4      157.2°  -55.6°  129.2°   E4                                                                                         
H5      -29.4°  115.5°  -56.6° -169.3°   H5                                                                                  
E6      152.1°  -62.6°  124.4°   -8.0° -177.2°   E6                                                                           
H7      -35.2°  109.7°  -62.3°  164.4°   -5.8°  172.2°   H7                                                                    
E8      121.4°  -93.4°   94.8°  -37.9°  150.8°  -30.9° -156.6°   E8                                                             
H9      126.1°  -89.2°  106.0°  -42.4°  148.2°  -34.6°  151.6°   25.5°   H9                                                      
E10     -81.4°   65.9°  -95.6°  108.7°  -60.7°  116.5°  -56.7° -135.9°  151.0°   E10                                              
H11     -50.2°   93.8°  -73.8°  145.4°  -24.0°  153.4°  -19.4°  163.5° -169.3°  -37.4°   H11                                       
E12     109.4° -106.6°   86.9°  -54.0°  136.3°  -46.1°  141.6°  -20.6°  -19.6° -156.1°  159.6°   E12                                
H13      82.1° -127.6°   72.3°  -89.1°  101.5°  -81.2°  105.6°  -59.8°  -46.8°  162.2°  125.0°   39.2°   H13                         
E14    -120.2°   27.7° -132.3°   73.6°  -95.9°   81.5°  -90.8° -109.5°  113.5°  -39.1°  -72.1° -127.6°  155.4°   E14                  
H15    -107.2°  -50.2° -134.8°   95.4°  -80.8°   98.9°  -75.7°  124.3°  103.2°  -72.8°  -71.2°  121.2°  106.2°   59.6°   H15           
H16      53.3°  134.3°  -30.3° -105.7°   76.0° -103.9°  -80.5°  -80.9° -101.8°  -87.0°   83.5°  -83.2°   88.3° -112.9° -154.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qyca_ :    (LYS46)  (GLY274)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Phenylcoumaran benzylic ether reductase |Loblolly pine (Pinus taeda) [TaxId: 3352]
 d2qw8a_ :    (THR45)  (GLY269)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ocimum basilicum [TaxId: 39350]
 d2r2ga_ :    (LYS44)  (GLY269)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ocimum basilicum [TaxId: 39350]
 d3c3xa_ :    (LYS44)  (GLY269)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ocimum basilicum [TaxId: 39350]
 d1qyda_ :    (VAL46)  (GLY279)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Pinoresinol-lariciresinol reductase |Giant arborvitae (Thuja plicata) [TaxId: 3316]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2