Protein Concepts Dictionary

Tableau information

Concept source:  d1tz7a1  amino acid (a.a.) range (ARG267)(ASN442)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHEHEHEHHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ARG267)  (LYS278) H1
	  (ASP281)  (HIS287) E2
	  (HIS287)  (GLU292) H3
	  (GLU292)  (PRO298) E4
	  (ARG308)  (PRO313) E5
	  (PRO313)  (PHE325) H6
	  (PRO329)  (LEU335) E7
	  (THR339)  (LYS350) H8
	  (GLY353)  (ILE357) E9
	  (ILE357)  (ASP363) H10
	  (ASN377)  (THR381) E11
	  (ILE389)  (ASN395) H12
	  (GLY397)  (GLY409) H13
	  (LYS413)  (SER428) H14
	  (LYS431)  (GLN436) E15
	  (GLN436)  (ASN442) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2      133.2°   E2                                                                                                       
H3     -153.6°   72.0°   H3                                                                                                
E4      111.0°   48.0°  -91.8°   E4                                                                                         
E5      -77.2° -148.1°  -76.7°  140.5°   E5                                                                                  
H6      -43.8°  174.4°  111.8°  126.8°   36.6°   H6                                                                           
E7      107.0°  -26.8°  -96.9°   54.9° -162.4°  150.8°   E7                                                                    
H8      -60.5°  166.1°   94.1° -135.5°   18.4°  -18.3° -164.8°   H8                                                             
E9       54.4°  -79.5° -146.1°   82.3°  127.1°   98.1°  -52.8° -113.5°   E9                                                      
H10    -116.1°   41.1°  -76.6°   87.5° -124.8° -142.8°   37.8° -136.8°  -69.8°   H10                                              
E11      56.4°  -79.3° -150.0°   61.7°  132.6°   96.3°  -57.3°  114.5°  -27.2°  -87.7°   E11                                       
H12     111.8°   27.9°  -88.7°   67.4° -147.6° -152.8°   14.9° -156.7°  -58.2°  -22.9°  -69.0°   H12                                
H13     -59.6°  143.3°   95.9° -168.2°  -34.8°  -41.7°  132.5°  -35.1°  -96.1°  103.0° -112.7° -121.6°   H13                         
H14    -112.0°  112.4°   41.6° -126.8°  -35.8°  -72.2°  133.4°  -53.9°  149.8°  100.2° -168.3°  120.6°   57.3°   H14                  
E15      74.1°  -72.2°  129.1°   37.4°  135.7°  102.3°  -60.8°  118.9°  -54.0°  -98.2°  -27.8°   75.5° -133.7° -154.9°   E15           
H16     -37.5°  101.2° -148.7°  106.4° -102.2°  -77.7°   74.7°  -90.5°   25.3°   79.0°   46.0°  -75.7°  -70.9° -126.8°   73.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2x1ia_ :   (SER274)  (ALA456)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Thermus brockianus [TaxId: 56956]
 d1tz7b_ :   (ARG267)  (ASN442)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylomaltase MalQ |Aquifex aeolicus [TaxId: 63363]
 d1cwya_ :   (SER274)  (ALA456)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylomaltase MalQ |Thermus aquaticus [TaxId: 271]
 d1fp8a_ :   (SER274)  (ALA456)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylomaltase MalQ |Thermus aquaticus [TaxId: 271]
 d1x1na1 :   (ASP292)  (GLY477)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylomaltase MalQ |Potato (Solanum tuberosum) [TaxId: 4113]
 d1tz7a1 :   (ARG267)  (ASN442)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Amylomaltase MalQ |Aquifex aeolicus [TaxId: 63363]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1