Protein Concepts Dictionary

Tableau information

Concept source:  d4e3ib_  amino acid (a.a.) range (SER169)(GLN361)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHEEEHHEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER169)  (LYS183) H1
	  (TYR199)  (GLU205) E2
	  (GLY222)  (THR226) E3
	  (THR226)  (ASN237) H4
	  (ASN237)  (ASP242) H5
	  (GLU245)  (SER257) H6
	  (TYR259)  (GLY263) E7
	  (ASP264)  (LEU269) E8
	  (GLY270)  (ASP275) E9
	  (ASN279)  (ASP288) H10
	  (ASP288)  (ALA294) H11
	  (PRO297)  (PRO303) E12
	  (ALA310)  (GLY320) E13
	  (GLY323)  (ILE329) E14
	  (GLU333)  (ASN341) E15
	  (ASN346)  (GLN361) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2      113.6°   E2                                                                                                       
E3      -21.9°  114.5°   E3                                                                                                
H4       79.0°  -94.3°  100.8°   H4                                                                                         
H5       68.7° -159.7°   75.6°   65.9°   H5                                                                                  
H6     -102.7°   16.1° -109.1°  -80.4° -146.1°   H6                                                                           
E7      -83.6°   31.4°  -83.2°  -98.0° -149.9°  -29.1°   E7                                                                    
E8      109.9° -133.8°  100.1°  108.8°   55.4°  147.3°  151.6°   E8                                                             
E9       46.5°   76.0°  -63.7°  -54.6°  -94.7°  -61.1°  -56.3°  149.7°   E9                                                      
H10    -151.4°  -80.6° -130.1°  126.4°  107.0°   95.4°  103.1°  -53.4°  156.5°   H10                                              
H11     116.5° -106.9°  131.4°   50.5°  -57.6°  103.5°  132.2°  -65.1°  105.1°  -79.8°   H11                                       
E12      61.8°  153.6°   71.6°   59.5°   -9.4°  138.4°  140.8°  -64.8°   85.2° -116.2°  -60.1°   E12                                
E13    -132.0°  -74.5° -110.2°  149.0°  120.0°   90.6°   87.2°  -65.1°  143.0°  -24.6° -104.4° -129.3°   E13                         
E14      49.1°  112.4°   70.2°  -31.2°   52.6°  -96.3° -100.2°  107.5°  -44.2°  150.6°   71.3°   43.4°  172.6°   E14                  
E15    -130.4°   67.2° -109.3°  149.1° -128.0°   83.3°   79.1°  -73.1°  135.1°  -30.1° -109.4° -137.1°   -8.1°  179.3°   E15           
H16      22.0°  123.8°   41.1°  -61.0°   51.7° -109.2°  -98.5°  102.4°  -48.1°  155.4°   94.5°   43.3°  148.7°  -29.8°  149.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1l0db_ :   (SER169)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d3iwob_ :   (SER169)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d1i5qb_ :   (PRO192)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d3gqzb_ :   (PRO192)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d2blsa_ :   (SER169)  (LEU360)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d3fkvb_ :   (SER169)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d1c3ba_ :   (PRO192)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d4e3ib_ :   (SER169)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]
 d1l0fb_ :   (SER169)  (GLN361)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |AMPC beta-Lactamase, class C |Escherichia coli, cephalosporinase [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.3