Protein Concepts Dictionary

Tableau information

Concept source:  d3ov2a1  amino acid (a.a.) range (HIS5)(VAL223)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEEHHEHHHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (HIS5)   (GLN11) H1
	   (PRO16)   (PRO27) E2
	   (PRO28)   (SER34) E3
	   (THR35)   (ASN45) H4
	   (GLN50)   (LYS62) H5
	   (LYS66)   (HIS71) E6
	   (GLU74)   (ARG80) H7
	   (PHE91)  (GLY118) H8
	  (PRO120)  (THR125) H9
	  (THR125)  (SER131) E10
	  (GLY139)  (GLY149) H11
	  (ASN155)  (TYR160) E12
	  (MET166)  (ASN181) H13
	  (GLY183)  (THR194) E14
	  (PHE206)  (GLY214) H15
	  (GLY214)  (VAL223) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2       51.1°   E2                                                                                                       
E3      -73.1°  -76.1°   E3                                                                                                
H4      111.6°   62.9° -109.0°   H4                                                                                         
H5      -96.2° -146.6° -103.2°  142.2°   H5                                                                                  
E6      115.5°   84.8°  145.9°   37.0°  108.2°   E6                                                                           
H7      122.8°   71.7°  -96.9°  -18.7°  140.0°   49.8°   H7                                                                    
H8       79.5°  128.6° -105.5°  145.5°  -18.5°  108.5°  152.6°   H8                                                             
H9     -146.0° -120.7°   73.0°  -81.4°   89.7°  -93.9°  -63.5°  108.1°   H9                                                      
E10     -72.6°  -46.3°   36.4°  -75.5°  139.5° -111.8°  -68.8°  137.9°   81.3°   E10                                              
H11      54.5°   88.4° -121.4°  112.8°  -63.1°   85.3°  131.2°  -45.9° -150.8°  126.1°   H11                                       
E12     -74.5°  -50.6°   32.6°  -78.2°  135.8° -114.8°  -70.2°  135.8°   78.0°   -4.5°  128.6°   E12                                
H13     119.4°  140.6° -142.4°   99.0°  -43.7°   64.9°  102.6°  -50.0°   87.4°  168.0°  -65.8°  165.4°   H13                         
E14     -64.4°  -30.3°   49.8°  -68.5° -149.2° -102.0°  -67.0°  140.2°  -94.4°  -16.0°  114.3°  -20.4°  166.8°   E14                  
H15      63.7° -102.6° -121.3°  122.5°  -48.5°   90.1°  139.4°   31.7°  136.7° -136.2°  -14.7° -137.7°  -55.7° -126.8°   H15           
E16     112.0°  140.4° -138.9°  106.5°   37.0°   71.2°  111.0°  -41.7°   92.6°  173.3°  -59.4°  169.0°   -8.5° -170.6°   48.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ov3b1 :     (ASN3)  (VAL223)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Curcuma longa [TaxId: 136217]
 d3wd7a1 :    (GLY-1)  (ILE223)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Citrus microcarpa [TaxId: 164113]
 d1u0ua1 :     (ASP5)  (ILE226)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Dihydropinosylvin synthase |Scots pine (Pinus sylvestris) [TaxId: 3349]
 d3ov2c1 :     (LEU4)  (VAL223)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Curcuma longa [TaxId: 136217]
 d1cgka1 :     (VAL4)  (ILE223)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d1cmla1 :     (VAL4)  (ILE223)   [view usage] : c.95.1.2 |Thiolase-like |Thiolase-like |Chalcone synthase-like |Chalcone synthase |Alfalfa (Medicago sativa) [TaxId: 3879]
 d3ov2a1 :     (HIS5)  (VAL223)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Curcuma longa [TaxId: 136217]
 d3ov3a1 :     (HIS5)  (VAL223)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Curcuma longa [TaxId: 136217]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95