Protein Concepts Dictionary

Tableau information

Concept source:  d3rhpa_  amino acid (a.a.) range (VAL523)(MET734)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEHEHEHEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (VAL523)  (ILE540) H1
	  (ILE540)  (PRO546) E2
	  (ASN553)  (PRO563) E3
	  (CYS567)  (TRP573) E4
	  (LEU577)  (GLY591) H5
	  (VAL595)  (ALA599) E6
	  (THR605)  (GLY617) H7
	  (VAL622)  (GLY628) E8
	  (SER629)  (ASP639) H9
	  (ARG644)  (THR649) E10
	  (THR652)  (LEU664) H11
	  (VAL670)  (GLY675) E12
	  (SER678)  (ALA684) E13
	  (LEU688)  (PHE700) H14
	  (GLY711)  (GLU716) E15
	  (GLU716)  (MET734) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2       33.6°   E2                                                                                                       
E3     -159.2°  163.6°   E3                                                                                                
E4      160.8°  131.7°  -39.0°   E4                                                                                         
H5      -12.0°  -45.6° -148.0°  165.0°   H5                                                                                  
E6      157.1°  123.5°  -43.0°  -16.0°  168.9°   E6                                                                           
H7      -44.8°  -74.5° -121.8°  134.6°  -34.9°  150.6°   H7                                                                    
E8      143.3°  119.8°  -43.9°  -45.5°  148.8°  -32.2° -161.9°   E8                                                             
H9        4.6°  -29.6°  161.8° -159.2°   16.3° -153.1°   49.4°  139.3°   H9                                                      
E10     148.2°  120.9°  -51.4°  -12.7°  153.9°  -21.8°  130.7°  -54.0° -146.7°   E10                                              
H11     -28.4°  -54.2°  132.8°  170.2°  -24.5°  157.3°  -51.4°  125.8°  -29.3° -174.8°   H11                                       
E12     150.0°  122.1°  -49.8°  -10.9°  155.9°  -20.0°  132.1°  -52.2° -148.4°    2.0° -175.2°   E12                                
E13     108.8°   89.3°  -88.6°  -52.3°  114.2°  -59.1°  102.1°  -89.6°  108.3°  -39.9° -137.2°  -41.9°   E13                         
H14     -82.7°  -99.4°   80.7°  116.0°  -77.7°  109.1°  -88.0°   79.1°   82.9° -128.3°   54.4° -126.3° -168.1°   H14                  
E15      99.4°   74.0° -100.5°  -61.6°  107.8°  -62.9°  107.2°  -88.3°  -97.6°  -49.1° -126.6°  -50.8°  -18.6° -160.5°   E15           
H16     113.0° -146.3°  -47.4°  -81.7°  101.1°  -89.9°   77.3°  -85.4°  116.8°  -91.6°   93.6°  -90.6°  114.5°  -61.4°  132.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4lh1b_ :   (VAL155)  (ARG374)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4liha_ :   (ASP120)  (VAL329)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d4e3xa_ :   (THR154)  (ILE375)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3v9ka_ :   (VAL155)  (ILE375)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4i26c_ :   (ILE118)  (LEU329)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d4i8pb_ :   (TYR106)  (ILE323)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Maize (Zea mays) [TaxId: 4577]
 d3iwkc_ :   (LEU104)  (ILE321)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d3u4jd_ :   (ILE115)  (LYS328)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d3rhhc_ :   (LYS103)  (LEU320)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3u4ja_ :   (ILE115)  (LYS328)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d4fr8a_ :   (PRO113)  (TYR315)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Human (Homo sapiens), mitochondrial [TaxId: 9606]
 d3jz4a_ :   (PRO100)  (MET312)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3iwkl_ :   (LEU104)  (ILE321)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d1ad3a_ :    (GLU76)  (PHE270)   [view usage] : c.82.1.1 |ALDH-like |ALDH-like |ALDH-like |Aldehyde reductase (dehydrogenase), ALDH |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4o6ra_ :    (PRO93)  (ILE308)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d2j6lb_ :   (LEU113)  (ILE330)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3v9ga_ :   (THR154)  (ILE375)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4i8qa_ :   (THR103)  (ILE322)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Solanum lycopersicum [TaxId: 4081]
 d3iwkh_ :   (LEU104)  (GLU309)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d2opxa_ :    (GLN98)  (VAL312)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]
 d3rjlb_ :   (PRO127)  (LYS348)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus licheniformis [TaxId: 279010]
 d2j6la_ :   (LEU113)  (ILE330)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3prlb_ :   (PRO102)  (LEU320)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus halodurans [TaxId: 86665]
 d3b4wa_ :   (PRO102)  (LEU315)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3ifga_ :   (LEU104)  (LEU318)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
 d3iwka_ :   (LEU104)  (ILE321)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d3iwja_ :   (LEU104)  (LYS319)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Pea (Pisum sativum) [TaxId: 3888]
 d3v9gc_ :   (THR154)  (ILE375)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1t90a_ :   (ALA118)  (ILE311)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3u4jb_ :   (ILE115)  (ASP316)   [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.82