Protein Concepts Dictionary

Tableau information

Concept source:  d1g65d_  amino acid (a.a.) range (PHE22)(GLU244)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEEEEHHEEEEHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PHE22)   (LYS32) H1
	   (SER35)   (ALA41) E2
	   (GLY45)   (SER56) E3
	   (LYS66)   (ASP71) E4
	   (HIS73)   (MET78) E5
	   (LEU81)  (TYR102) H6
	  (ASN108)  (GLY123) H7
	  (VAL134)  (GLY140) E8
	  (GLN147)  (PRO153) E9
	  (GLY155)  (ARG159) E10
	  (ASN161)  (GLY166) E11
	  (GLU170)  (GLU179) H12
	  (LEU186)  (VAL200) H13
	  (ALA210)  (THR216) E14
	  (GLY220)  (ASN226) E15
	  (GLU227)  (GLU244) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2      -93.8°   E2                                                                                                       
E3       76.8°  170.5°   E3                                                                                                
E4     -111.9°  -38.8° -143.6°   E4                                                                                         
E5       91.4° -149.1°   35.1°  156.2°   E5                                                                                  
H6     -104.4°   31.3° -149.2°   -9.1°  164.2°   H6                                                                           
H7      117.9° -147.6°   41.9°  123.2°  -34.7°  132.2°   H7                                                                    
E8      -75.2°   24.0° -147.3°  -41.6°  160.0°  -32.5°  164.8°   E8                                                             
E9      120.1° -146.0°  -43.5°  119.3°  -38.9°  128.4°    4.2°  160.8°   E9                                                      
E10     -51.2°  -46.6°  125.2°  -80.1°  120.3°  -71.1°  154.6°  -39.7°  158.9°   E10                                              
E11      86.2°  176.5°   -9.5°  138.2°   34.4° -145.3°   33.2° -153.6°   34.4°  134.6°   E11                                       
H12      76.5°  -18.5°  152.9°  -54.3°  141.3°  -45.7° -160.8°   21.4° -161.2°   28.1°  162.4°   H12                                
H13     -91.3°  158.2°  -27.0°  153.0°    9.2°  162.1°  -29.9° -165.3°  -33.7°  126.5°  -25.3°  149.8°   H13                         
E14    -112.3°  -25.8°  158.6°   15.6° -153.6°   13.4°  128.6°  -37.2°  125.4°  -71.3°  151.7°  -43.5°  156.2°   E14                  
E15      41.6°  132.4°  -39.4° -150.6°   50.7° -144.9°  -77.1°  116.7°  -79.9°   85.8°  -48.8°  113.9°  -49.8°  153.9°   E15           
H16     -78.7°   82.4°  -97.3°  118.9°  -68.9°  113.2°  -96.7°   93.5° -100.6°   60.2° -101.1°   72.8°  -77.8°  103.4°  -74.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1yaua_ :    (PHE22)  (LEU233)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Thermoplasma acidophilum [TaxId: 2303]
 d4eu2a_ :    (TYR26)  (ALA249)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d4nnng_ :    (TYR17)  (GLN242)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1g0ug_ :    (TYR22)  (ASP240)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3unbf_ :    (PHE21)  (LEU243)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1g65c_ :    (PHE22)  (GLN241)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1g0ub_ :    (LEU21)  (GLY237)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1vsyc_ :  (LEU3019) (THR3242)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1irub_ :    (VAL19)  (LEU229)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d1iruc_ :    (TYR19)  (LYS251)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Cow (Bos taurus) [TaxId: 9913]
 d3unfp_ :    (TYR18)  (ALA246)   [view usage] : d.153.1.0 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3unfa_ :    (VAL19)  (TYR228)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d1g65b_ :    (LEU21)  (GLY237)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1g65d_ :    (PHE22)  (GLU244)   [view usage] : d.153.1.4 |Ntn hydrolase-like |N-terminal nucleophile aminohydrolases (Ntn hydrolases) |Proteasome subunits |Proteasome alpha subunit (non-catalytic) |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.153