Protein Concepts Dictionary

Tableau information

Concept source:  d2j5za_  amino acid (a.a.) range (CYS70)(MET274)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: HEEEEHEHEEEEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (CYS70)   (GLN76) H1
	   (TYR84)   (LEU88) E2
	   (ARG92)  (ASP101) E3
	  (GLY106)  (PHE110) E4
	  (PHE110)  (GLN114) E5
	  (SER123)  (ALA129) H6
	  (SER136)  (ASN142) E7
	  (ASN142)  (LEU148) H8
	  (GLY152)  (ASP162) E9
	  (GLY165)  (ALA173) E10
	  (ALA173)  (GLY179) E11
	  (GLN185)  (LYS190) E12
	  (GLY205)  (THR210) E13
	  (ASN221)  (HIS227) H14
	  (TRP258)  (GLY263) H15
	  (ARG269)  (MET274) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                              
E2      128.5°   E2                                                                                                       
E3      -65.3°  131.0°   E3                                                                                                
E4      146.0°  -75.7°  120.3°   E4                                                                                         
E5      -86.4° -145.0°   57.4°  -73.3°   E5                                                                                  
H6       27.6°  103.8°  -69.9°  167.2°  110.0°   H6                                                                           
E7      118.4°   10.7° -126.6°  -86.3° -154.8°  -93.2°   E7                                                                    
H8       66.3°   70.7°  -78.6° -145.6° -135.2°  -38.9°  -60.4°   H8                                                             
E9       92.1° -139.3°   58.0°  -69.5°    6.2°  114.8° -148.8°  136.6°   E9                                                      
E10    -106.1°   23.1° -121.1°   98.4°  165.7°  -80.7°   12.5°  -49.1°  159.5°   E10                                              
E11    -124.1°  -58.0°  162.0°   42.6°  105.9° -126.2°  -65.1° -118.7°  104.6°   73.1°   E11                                       
E12     -59.1°  113.6°  -24.6° -140.1°  -81.8°   52.1°  106.4°   54.0°  -82.7°   98.5°  171.4°   E12                                
E13      91.7° -117.6°  107.2°   54.3°   52.8°  117.2° -125.0° -153.1°   55.0° -131.7°  -60.0°  128.6°   E13                         
H14     -65.1° -166.3°   49.5°  -92.6°  -21.3°   89.2°  174.1°  119.6°   27.0°  168.6° -117.5°   71.0°  -58.0°   H14                  
H15      83.8° -142.7°   38.8°  -85.6°  -20.1°  101.3° -147.9°  117.4°  -19.3°  151.7° -123.6°   63.4°   72.8°   26.2°   H15           
E16     -80.0°   48.6° -115.3°  118.9° -166.4°  -56.7°   38.6°   36.9°  171.6°  -27.0°  -82.4°   90.7° -127.6° -145.1°  154.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1z3ua_ :   (CYS284)  (PRO493)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jhif_ :    (CYS89)  (PRO296)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j5za_ :    (CYS70)  (MET274)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2wnpf_ :    (CYS89)  (PRO296)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j0yc_ :    (CYS80)  (PRO287)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j60b_ :    (CYS70)  (MET274)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2j5zb_ :    (CYS70)  (MET273)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4epua_ :   (CYS286)  (PRO495)   [view usage] : d.171.1.0 |Fibrinogen C-terminal domain-like |Fibrinogen C-terminal domain-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.171