Protein Concepts Dictionary

Tableau information

Concept source:  d3qu7b_  amino acid (a.a.) range (LYS6)(SER218)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EHHHHHHEHHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS6)   (MET12) E1
	   (MET12)   (PHE17) H2
	   (SER19)   (GLY35) H3
	   (SER39)   (GLU47) H4
	   (THR50)   (GLY64) H5
	   (THR68)   (SER85) H6
	   (ALA95)  (GLY106) H7
	  (THR108)  (GLY114) E8
	  (LEU118)  (LEU124) H9
	  (GLU151)  (GLY161) H10
	  (ALA167)  (ASN172) E11
	  (PRO174)  (GLY184) H12
	  (PHE186)  (ASN191) E13
	  (GLN198)  (GLY204) H14
	  (ASP206)  (PRO210) E15
	  (MET212)  (SER218) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
H2      -95.2°   H2                                                                                                       
H3       36.6°  131.8°   H3                                                                                                
H4      153.4° -100.6°  123.5°   H4                                                                                         
H5      -45.8° -118.3°  -37.4°  136.4°   H5                                                                                  
H6       92.8°   -4.7°  129.4° -104.3°  113.8°   H6                                                                           
H7     -163.1°  -95.6° -130.8°   -9.8°  136.3°  -98.8°   H7                                                                    
E8      -32.4° -127.0°   -8.0°  130.4°  -30.5°  124.1°  137.0°   E8                                                             
H9      144.0°   49.7°  172.2°  -52.3°  150.4°   52.8°  -46.1°  176.4°   H9                                                      
H10     137.3°  -67.8°  139.9°  -37.8°  173.8°  -72.3°  -38.7°  147.4°  -32.4°   H10                                              
E11     -22.9°   80.4°  -54.3°  175.9°  -44.5°   76.9°  174.0°  -47.7°  129.5°  141.0°   E11                                       
H12     153.5° -110.7°  117.1°  -18.7°  119.5° -113.4°   17.0°  122.2°  -61.2°  -55.1° -163.7°   H12                                
E13     -32.2°   65.3°  -67.7°  163.4°  -60.2°   62.1°  160.8°  -62.0°  114.9°  125.6°  -16.0° -172.4°   E13                         
H14     129.9° -132.4°   94.1°  -31.9°  105.9° -135.8°  -37.0°  100.0°  -83.0°  -68.0°  147.2°  -23.9°  161.9°   H14                  
E15     -52.2°   43.0°  -88.8°  138.8°  -84.8°   40.9°  136.8°  -84.3°   92.2°  101.1°  -40.7°  153.2°  -24.8°  165.9°   E15           
H16     171.4°  -78.5°  149.5°  -35.1°  132.5°  -80.5°   25.5°  152.0°  -31.6°  -45.6°  148.6°  -34.1°  139.7°  -58.0°  121.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3qu4c_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu4d_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3s6je_ :   (THR108)  (HIS319)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Pseudomonas syringae [TaxId: 323]
 d3quqa_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qypa_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu9a_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu4b_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3quba_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu2a_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3quta_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qx7a_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu4e_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu4f_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu4a_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qxga_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu7b_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qxgb_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3quca_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu5b_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu7a_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3qu5a_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
 d3r9ka_ :     (LYS6)  (SER218)   [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108