Protein Concepts Dictionary

Tableau information

Concept source:  d1hfbc_  amino acid (a.a.) range (SER103)(GLY306)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHHEHEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER103)  (TYR109) E1
	  (ASP125)  (VAL128) H2
	  (ASN133)  (GLY152) H3
	  (PRO154)  (GLU158) E4
	  (LEU168)  (VAL172) H5
	  (SER173)  (ILE177) E6
	  (GLY178)  (SER184) H7
	  (SER184)  (LEU194) H8
	  (PHE196)  (ASN202) E9
	  (LEU208)  (HIS220) H10
	  (HIS220)  (PHE224) E11
	  (ILE235)  (LYS239) E12
	  (HIS243)  (ARG249) E13
	  (ALA259)  (LEU269) H14
	  (GLY275)  (SER281) E15
	  (ASN291)  (GLY306) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
H2      125.4°   H2                                                                                                       
H3      164.1°  -44.6°   H3                                                                                                
E4      -42.6°  113.8°  146.8°   E4                                                                                         
H5     -147.4°   29.7°   32.3° -115.2°   H5                                                                                  
E6      -52.7°  100.0°  133.9°  -14.2° -101.7°   E6                                                                           
H7       92.5° -130.9° -103.0°   71.5° -101.8°  -77.8°   H7                                                                    
H8      138.0°  -81.3°  -40.2°  160.9°  -71.9° -164.8°  -89.9°   H8                                                             
E9      -67.2°   72.9°  112.6°  -41.1°   81.4°  -27.9° -100.4° -152.8°   E9                                                      
H10     101.0° -129.9°  -85.6°  113.1° -111.0°  125.0°   53.5°  -49.4°  152.2°   H10                                              
E11      26.3°  140.8° -149.2°   64.0°  170.3°   76.4°   87.2° -112.2°   93.5°  -77.2°   E11                                       
E12    -158.4°  -35.2°   21.5° -125.5°  -11.5° -112.5°  -99.7°   60.5°  -92.8° -100.6°  169.7°   E12                                
E13     -66.6°   59.4°  103.7°  -65.8°   82.8°  -57.1° -134.4°  133.2°  -34.7°  163.6°   88.3°  -92.3°   E13                         
H14      93.0° -138.6° -100.8°   82.7° -109.1°   91.4°   16.9°  -78.2°  116.1°  -37.0°   80.5° -103.9°  148.3°   H14                  
E15     -48.3°   80.1°  116.8°  -72.2°  108.8°  -71.2° -139.9°  123.8°  -60.5°  131.1°   61.5°  115.3°  -32.5°  140.7°   E15           
H16     152.4°  -76.8°  -43.5°  117.2°  -48.4°  112.5°   60.1°  -52.8°  111.4°  -66.9° -141.2°  -41.8°  129.0°  -62.1°  157.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1hfbc_ :   (SER103)  (GLY306)   [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId: 4932]
 d1kfla_ :    (ILE89)  (GLY292)   [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Escherichia coli, phenylalanine-regulated isozyme [TaxId: 562]
 d1gg1b_ :    (ILE89)  (GLY292)   [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Escherichia coli, phenylalanine-regulated isozyme [TaxId: 562]
 d1n8fa_ :    (ILE89)  (GLY292)   [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Escherichia coli, phenylalanine-regulated isozyme [TaxId: 562]
 d1hfbh_ :   (SER103)  (ASN286)   [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Baker's yeast (Saccharomyces cerevisiae), tyrosine-regulated isozyme [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1