Tableau information
Concept source: d4afna_ amino acid (a.a.) range (VAL7)(SER227)
nSSEs in this Concept: 16
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEEHHEHEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL7) (THR11) E1
(ILE17) (GLY29) H2
(VAL31) (THR37) E3
(SER38) (GLY53) H4
(GLU55) (VAL60) E5
(SER65) (GLN78) H6
(LEU84) (ASN89) E7
(ALA90) (ASP95) E8
(LYS102) (VAL124) H9
(LEU125) (ALA131) H10
(TRP133) (ILE139) E11
(GLN151) (VAL172) H12
(ALA176) (PHE186) E13
(THR189) (LEU195) H14
(GLU197) (ILE207) H15
(ALA215) (SER227) H16
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 173.5° H2
E3 -17.9° -166.8° E3
H4 138.9° -34.7° 154.0° H4
E5 -30.6° 155.9° -17.2° 169.3° E5
H6 160.5° -15.4° 156.5° -32.5° 157.3° H6
E7 -17.8° 155.7° -33.5° 121.5° -48.2° 144.9° E7
E8 -16.2° 160.2° -33.0° 128.2° -41.2° 158.9° -19.0° E8
H9 171.7° -14.6° 156.5° -48.4° 141.8° -27.4° -169.9° -162.5° H9
H10 -155.5° 22.3° -168.3° -31.9° 154.1° 34.9° -144.8° -139.3° -26.7° H10
E11 -19.3° 154.3° -34.2° 120.5° -49.4° 142.9° -2.3° -21.3° 168.8° -144.9° E11
H12 156.6° -28.4° 148.4° -57.5° 131.4° -43.0° -165.2° 147.8° -16.1° -28.0° -167.0° H12
E13 -38.2° 135.5° -51.3° 102.8° -67.5° 124.0° -20.9° -38.0° 150.1° 131.2° -19.0° -159.2° E13
H14 26.3° -147.5° -43.8° 112.9° -56.4° 141.1° 12.3° 18.3° -159.3° -132.9° 13.3° -154.0° -21.6° H14
H15 126.7° -52.9° 137.2° -53.3° 127.2° -66.2° 123.9° 111.2° -51.8° -31.3° 125.3° -42.1° -122.5° 112.1° H15
H16 140.1° -45.4° 131.5° -74.1° 114.4° -59.2° 154.2° 135.3° -31.8° -43.1° 156.6° 17.2° 167.6° 148.7° 45.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3gz4b_ : (ILE12) (GLY227) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 217992]
d3ftpa_ : (GLN8) (SER229) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 28450]
d3pk0d_ : (ARG7) (THR230) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3t7cb_ : (LYS8) (VAL257) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d1q7ba_ : (LYS6) (ALA223) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |beta-keto acyl carrier protein reductase |Escherichia coli [TaxId: 562]
d4avya_ : (GLN11) (GLY221) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2p68a_ : (LYS8) (SER230) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
d2japc_ : (LYS8) (VAL228) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Streptomyces clavuligerus [TaxId: 1901]
d1vl8b_ : (ARG10) (SER235) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Gluconate 5-dehydrogenase |Thermotoga maritima [TaxId: 2336]
d2jahc_ : (LYS8) (VAL228) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Streptomyces clavuligerus [TaxId: 1901]
d4n5ma_ : (ARG4) (SER226) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
d4jp2a_ : (LYS4) (ARG212) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d3tzqd_ : (LYS8) (SER229) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d3rkua_ : (LYS14) (SER241) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1ydeg_ : (LYS10) (ALA232) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3v2ga_ : (LYS32) (ALA251) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1ydea1 : (LYS10) (ALA232) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Retinal dehydrogenase/reductase 3 |Human (Homo sapiens) [TaxId: 9606]
d1ydem_ : (LYS10) (ALA232) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2jaha_ : (LYS8) (VAL228) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Streptomyces clavuligerus [TaxId: 1901]
d4k6ca_ : (LYS3) (SER227) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
d3tzhc_ : (LYS10) (ALA227) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Vibrio cholerae [TaxId: 593588]
d3lf2c_ : (ALA9) (LEU242) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2cfca_ : (MET1) (GLY230) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Xanthobacter autotrophicus [TaxId: 78245]
d3tzha_ : (LYS10) (ALA227) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Vibrio cholerae [TaxId: 593588]
d3pk0a_ : (ARG7) (THR230) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d4ag3b_ : (LYS6) (ALA226) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d2japa_ : (LYS8) (VAL228) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Streptomyces clavuligerus [TaxId: 1901]
d1vl8a_ : (ARG10) (SER235) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Gluconate 5-dehydrogenase |Thermotoga maritima [TaxId: 2336]
d3tzka_ : (LYS10) (SER228) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Vibrio cholerae [TaxId: 593588]
d3u09a_ : (LYS10) (ALA227) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Vibrio cholerae [TaxId: 243277]
d4ag3a_ : (VAL7) (SER227) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3lf2b_ : (ALA9) (ALA243) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d1ahha_ : (LYS12) (SER233) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |7-alpha-hydroxysteroid dehydrogenase |Escherichia coli [TaxId: 562]
d4ospa_ : (LYS7) (GLY233) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Streptomyces fradiae [TaxId: 1906]
d4afna_ : (VAL7) (SER227) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
d3pk0b_ : (ARG7) (THR230) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium smegmatis [TaxId: 246196]
d3p19a_ : (LYS3) (TYR219) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Vibrio vulnificus [TaxId: 672]
d1ydei_ : (LYS10) (ALA232) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3t7ca_ : (LYS8) (VAL257) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.2