Protein Concepts Dictionary

Tableau information

Concept source:  d3oxog2  amino acid (a.a.) range (TYR279)(PRO471)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EHEEEHEEHEEEEEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TYR279)  (ILE284) E1
	  (ILE284)  (ILE294) H2
	  (THR299)  (GLU305) E3
	  (GLU330)  (PRO336) E4
	  (GLY337)  (SER342) E5
	  (SER342)  (GLY353) H6
	  (ASN356)  (GLY361) E7
	  (MET363)  (TYR368) E8
	  (GLY386)  (SER392) H9
	  (LYS397)  (MET402) E10
	  (GLU415)  (LEU419) E11
	  (ASN428)  (GLU433) E12
	  (ALA435)  (ASP440) E13
	  (GLY444)  (GLU452) E14
	  (VAL456)  (SER462) H15
	  (CYS465)  (PRO471) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
H2     -133.8°   H2                                                                                                       
E3      -47.6° -152.0°   E3                                                                                                
E4      167.9°   36.5° -135.0°   E4                                                                                         
E5      -55.8° -157.1°  -12.2° -129.6°   E5                                                                                  
H6     -115.2°   87.2° -118.5°   74.9° -107.6°   H6                                                                           
E7      -13.9°  124.9°  -61.1°  161.3°  -68.2° -107.2°   E7                                                                    
E8      127.7°  -89.8°  108.9°  -64.3°   96.7°  -24.7° -124.6°   E8                                                             
H9     -148.1°   66.6°  129.2°   43.0°  117.1°  -33.4° -140.4°  -23.4°   H9                                                      
E10     -26.5°  109.9°  -73.9°  146.4°  -82.2° -108.9°  -15.0° -130.6° -139.3°   E10                                              
E11      63.6° -104.0°  -48.8° -108.4°  -58.8° -165.2°   74.4° -143.4° -144.0°   76.6°   E11                                       
E12     -53.2°   82.0°  -98.3°  118.5° -108.3°  109.0°  -42.9° -133.6°  127.3°  -27.9°   82.4°   E12                                
E13     121.2° -104.1°   77.2°  -67.6°   66.7°  -70.0°  131.0°   45.8°  -55.2°  145.9°  -97.6°  173.7°   E13                         
E14     -78.2°   56.2° -119.3°   92.7° -130.8°  107.0°  -68.8° -127.4°  111.1°  -53.8°   87.4°  -25.9°  160.2°   E14                  
H15      58.9° -141.2°   13.1° -122.4°  -17.1° -123.0°   72.7° -108.2° -124.9°   84.5°   42.7°  106.4°  -70.1°  123.6°   H15           
E16    -143.0°  -25.6°  169.2°   34.4°  160.0°   61.7° -129.7°   66.5°   44.3° -116.6° -129.0°  -91.5°   93.3°  -69.1°  156.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3oxog2 :   (TYR279)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |automated matches |Pig (Sus scrofa) [TaxId: 9823]
 d1opeb1 :   (TYR279)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |Succinate:CoA transferase, C-terminal domain |Pig (Sus scrofa) [TaxId: 9823]
 d3oxoh2 :   (TYR279)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |automated matches |Pig (Sus scrofa) [TaxId: 9823]
 d3oxof2 :   (TYR279)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |automated matches |Pig (Sus scrofa) [TaxId: 9823]
 d3dlxa2 :   (TYR318)  (PRO510)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |Succinate:CoA transferase, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d3oxoe2 :   (TYR279)  (PRO471)   [view usage] : c.124.1.3 |NagB/RpiA/CoA transferase-like |NagB/RpiA/CoA transferase-like |CoA transferase beta subunit-like |automated matches |Pig (Sus scrofa) [TaxId: 9823]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.124