Protein Concepts Dictionary

Tableau information

Concept source:  d2at3x_  amino acid (a.a.) range (THR3)(LYS184)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEEEEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR3)    (ALA8) E1
	   (ASN13)   (ASN19) H2
	   (ASP21)   (VAL25) E3
	   (THR26)   (LEU31) E4
	   (TYR40)   (ALA46) E5
	   (LEU53)   (ASP61) E6
	   (GLN65)   (VAL76) E7
	   (GLY80)   (ASN85) E8
	   (ASN85)   (ASP90) E9
	  (ASN103)  (VAL109) E10
	  (MET110)  (ASP114) E11
	  (SER115)  (GLY126) E12
	  (LYS128)  (ARG139) E13
	  (GLY146)  (ALA156) H14
	  (PHE163)  (LYS167) E15
	  (ASN175)  (LYS184) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
H2      104.8°   H2                                                                                                       
E3      140.4°  -83.5°   E3                                                                                                
E4      142.0° -112.6°  -54.1°   E4                                                                                         
E5      -46.1° -121.4°  154.1°  105.0°   E5                                                                                  
E6      125.5°   46.9°  -39.0°  -86.9°  166.8°   E6                                                                           
E7      -65.4° -150.9°  122.2°   78.3°  -31.9°  161.1°   E7                                                                    
E8      128.4°  -47.1°  -85.8°  -76.8°  105.5°  -71.3°  115.8°   E8                                                             
E9       85.8°  -21.0°  -92.3° -132.1°  113.5°  -53.3°  145.2°  -66.6°   E9                                                      
E10      46.3°  122.1°   96.2°  113.2°  -77.3°  103.5°  -72.3°  168.9°  102.3°   E10                                              
E11     -36.4°   68.6°  129.2° -176.7°  -72.0°   95.9°  -99.2°  102.5°   49.5°  -67.8°   E11                                       
E12    -145.7°  -76.8°  -73.8°  -45.1°  103.1°  -81.2°   96.2°  -32.6°  -97.6°  158.1° -133.6°   E12                                
E13      24.2°   91.6°  120.0°  152.6°  -70.3°  101.7°  -86.8°  130.6°   70.7°  -39.6°   28.2°  161.3°   E13                         
H14     136.5° -117.3°  -59.6°   -6.1°   99.1°  -93.0°   72.3°  -79.0° -137.4°  111.4°  171.0°  -46.7°  149.8°   H14                  
E15     -66.4°   38.4°  114.3°  149.8°  -91.4°   75.4° -122.9°   74.4°   22.4°  -94.9°  -30.7°  107.0°  -57.0°  153.2°   E15           
H16     -94.2° -120.2°  115.3°   61.4°  -48.1°  139.3°  -39.6°   76.6°  131.9° -112.0° -115.4°   58.5° -118.3°   56.1°  119.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3flla_ :     (THR3)  (LYS184)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 4 |Rhodnius prolixus [TaxId: 13249]
 d3tgaa_ :     (THR3)  (LEU181)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 4 |Rhodnius prolixus [TaxId: 13249]
 d2at3x_ :     (THR3)  (LYS184)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |automated matches |Rhodnius prolixus [TaxId: 13249]
 d1d2ua_ :     (THR3)  (LYS184)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 4 |Rhodnius prolixus [TaxId: 13249]
 d1sxua_ :     (THR3)  (LYS184)   [view usage] : b.60.1.1 |Lipocalins |Lipocalins |Retinol binding protein-like |Nitrophorin 4 |Rhodnius prolixus [TaxId: 13249]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.60