Protein Concepts Dictionary

Tableau information

Concept source:  d2q17c_  amino acid (a.a.) range (HIS53)(ASP304)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EEHHEEHHEEEHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (HIS53)   (ARG58) E1
	   (PHE60)   (THR65) E2
	   (ALA70)   (GLY80) H3
	   (THR83)   (GLY89) H4
	   (GLY89)   (PHE94) E5
	  (TRP114)  (ARG119) E6
	  (SER145)  (GLY157) H7
	  (THR162)  (GLY172) H8
	  (ILE195)  (GLY198) E9
	  (HIS202)  (ALA206) E10
	  (VAL233)  (SER238) E11
	  (THR244)  (SER249) H12
	  (ARG263)  (GLY267) E13
	  (ALA284)  (THR289) E14
	  (ASP291)  (GLY295) E15
	  (ARG300)  (ASP304) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
E2      -97.9°   E2                                                                                                       
H3       62.5° -107.1°   H3                                                                                                
H4      109.8°  -61.8°  -62.6°   H4                                                                                         
E5     -123.7°  -73.9°  173.7°  113.6°   E5                                                                                  
E6       42.3°   91.1°  -26.7°  -69.8°  158.8°   E6                                                                           
H7      -27.3°  112.4°   81.5°  136.8° -103.9°   67.5°   H7                                                                    
H8      -91.1°  -62.0°  150.9° -121.9°  -35.1°  124.3°   78.9°   H8                                                             
E9      137.3°   43.6° -105.5°  -42.9°  -70.8°  108.6°  155.9°  -85.1°   E9                                                      
E10     -49.6°  -98.8° -109.6° -151.9°   76.1°  -91.9°  -28.5°   51.2°  135.2°   E10                                              
E11      76.0°  155.1°   48.5°   97.1°  129.7°  -68.0°  -73.0°  140.9° -129.0°   95.4°   E11                                       
H12      58.8° -146.7°   84.0°  144.6°  -98.4°   85.9°  -36.8°  -92.8° -163.7°  -48.4°   48.9°   H12                                
E13     -94.9°  -60.5°  153.8° -119.4°  -32.0°  127.1°   82.7°   -3.9°  -81.6°   54.9°  143.1°  -95.7°   E13                         
E14      73.0°   85.9°  -22.9°   41.9°  154.9°  -30.7°  -97.4°  142.2°   84.3° -122.6°  -69.2°  106.6°  142.8°   E14                  
E15     -95.2°  -39.9° -140.3° -100.3°  -43.7°  115.6°  -92.1°  -22.1°   67.6°  -67.7° -162.4° -113.5°  -20.6°  123.4°   E15           
E16      64.7°  161.1°   72.5°  129.3°  108.6°  -80.9°  -48.7°  108.8° -155.3°   64.7°  -32.5°   16.6°  111.3°  -95.4°  129.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2q17a_ :    (HIS53)  (ASP304)   [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d2q17c_ :    (HIS53)  (ASP304)   [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d2q17e_ :    (THR54)  (LEU307)   [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d2q17d_ :    (HIS53)  (ASN303)   [view usage] : d.169.1.0 |C-type lectin-like |C-type lectin-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.169