Tableau information
Concept source: d1ipka1 amino acid (a.a.) range (LEU22)(VAL172)
nSSEs in this Concept: 16
String of secondary struct.elems. (SSEs) defining this concept: EEHHEEEEEEEEEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU22) (GLN26) E1
(ASN27) (LEU33) E2
(ARG35) (SER40) H3
(GLU44) (TYR49) H4
(ILE51) (LYS57) E5
(PRO58) (ASP68) E6
(LEU72) (SER77) E7
(ILE81) (ASN87) E8
(ASP89) (ASN94) E9
(GLY98) (PRO104) E10
(THR108) (ASN113) E11
(ASN119) (LEU125) E12
(GLY133) (PHE139) E13
(SER148) (SER154) H14
(SER154) (HIS163) H15
(PHE166) (VAL172) H16
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -157.4° E2
H3 -114.8° -47.0° H3
H4 48.9° -153.6° -150.7° H4
E5 14.1° 171.3° 125.3° 35.1° E5
E6 162.4° -40.1° 79.3° -113.7° 148.3° E6
E7 -25.2° 132.3° 91.6° -74.0° -39.0° 170.8° E7
E8 129.9° -72.7° 108.2° 81.1° 115.9° -32.6° 154.6° E8
E9 -58.8° 98.6° 65.0° -107.6° -72.9° 138.7° -34.3° 171.2° E9
E10 129.9° -71.6° -98.9° 83.7° 116.1° -33.2° 150.2° 14.7° -163.0° E10
E11 -37.1° 120.3° -84.0° -85.8° -51.2° 160.4° -13.5° 166.8° -21.8° -163.1° E11
E12 175.0° -25.2° -69.5° 128.5° 163.6° -16.5° 157.3° -48.1° 123.1° -49.7° 144.5° E12
E13 43.8° -158.7° -144.0° 7.2° -29.7° 118.6° -68.6° 86.2° -102.6° 87.3° -80.9° 134.1° E13
H14 127.3° -71.6° 90.1° -86.5° 114.8° -38.4° 141.9° -28.1° 150.8° -13.4° -152.5° -53.8° -88.5° H14
H15 -69.7° 118.0° 149.0° -56.4° -66.1° 104.0° -84.3° 86.3° -97.1° 99.7° -85.3° 105.3° -61.6° 111.8° H15
H16 -59.9° 98.4° -72.2° 106.5° 73.8° -137.4° 37.9° 164.0° -12.3° -169.8° 24.4° -120.9° 102.8° -161.6° 86.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1ipkc1 : (LEU22) (VAL172) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]
d1ipka1 : (LEU22) (VAL172) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]
d1cava_ : (LEU59) (GLN208) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Jack bean (Canavalia ensiformis), canavalin/vinculin [TaxId: 3823]
d1ipjc1 : (LEU23) (VAL173) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]
d2phla1 : (LEU25) (VAL180) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]
d1ipjb1 : (LEU23) (VAL173) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |Soybean (Glycine max), beta-conglycinin beta subunit [TaxId: 3847]
d2phlc1 : (LEU25) (VAL180) [view usage] : b.82.1.2 |Double-stranded beta-helix |RmlC-like cupins |Germin/Seed storage 7S protein |Seed storage 7S protein |French bean (Phaseolus vulgaris), phaseolin [TaxId: 3885]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.82