Protein Concepts Dictionary

Tableau information

Concept source:  d2a7kb_  amino acid (a.a.) range (MET1)(GLU180)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EEHEHHEHEEHHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (ASN6) E1
	    (GLU9)   (LEU15) E2
	   (SER25)   (ASP42) H3
	   (ARG46)   (GLY52) E4
	   (PHE64)   (LEU70) H5
	   (ARG72)   (VAL93) H6
	   (PRO96)  (ASP102) E7
	  (GLY107)  (PHE116) H8
	  (ASP117)  (ALA122) E9
	  (THR124)  (MET129) E10
	  (PRO130)  (GLY135) H11
	  (CYS138)  (THR148) H12
	  (PHE151)  (CYS161) H13
	  (GLN162)  (ALA166) E14
	  (ALA166)  (ARG173) H15
	  (ASN176)  (GLU180) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
E2      162.0°   E2                                                                                                       
H3      -20.6°  177.4°   H3                                                                                                
E4      141.9°  -20.1°  162.4°   E4                                                                                         
H5     -129.3°   67.3° -110.5°  -86.7°   H5                                                                                  
H6        8.0° -154.2°   28.3° -134.1° -137.2°   H6                                                                           
E7      124.4°  -37.7°  144.7°  -17.8° -104.4°  116.5°   E7                                                                    
H8      -22.3°  172.5°   -7.2° -162.7°  107.1°  -30.3° -146.2°   H8                                                             
E9      103.3°  -59.3°  123.0°  -39.8° -126.5°   95.3°  -22.2°  125.6°   E9                                                      
E10    -122.5°   73.0° -105.0°   91.5°    9.3° -130.1°  108.8° -100.8° -131.0°   E10                                              
H11    -177.2°   20.9° -156.6°   40.9°  -48.1°  174.7°   58.4° -154.9°   79.4°  -55.1°   H11                                       
H12      21.6° -150.0°   32.1° -135.0°  120.7°  -23.8° -121.0°   28.2° -104.4° -112.0° -158.7°   H12                                
H13     138.2°  -30.6°  150.1°   25.5°  -91.1°  131.0°   29.6°  156.8°   41.8°  -98.9°  -43.9°  145.9°   H13                         
E14      22.8° -144.9°   36.9° -126.8°  145.9°   18.0° -109.4°   41.8°  -87.1°  141.7° -158.5°   41.8° -116.2°   E14                  
H15     -65.1°  127.9°  -50.8°  140.8°   65.7°  -72.5°  149.9°  -45.0° -153.5°   57.8°  112.7°  -55.7° -156.6°  -86.6°   H15           
E16      99.0°  -67.8°  113.7°  -53.1° -129.5°   91.7°  -40.1°  119.3°  -26.1°  137.9°   83.2° -109.7°   39.3°  -77.5° -164.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3g64b_ :    (LEU17)  (GLU199)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d4k3wa_ :    (LEU10)  (SER195)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Marinobacter aquaeolei [TaxId: 351348]
 d2j5ib_ :    (THR10)  (PRO193)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2a81a_ :     (MET1)  (GLU180)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pectobacterium carotovorum [TaxId: 554]
 d3g64a_ :    (LEU17)  (GLU199)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Streptomyces coelicolor [TaxId: 100226]
 d4mi2b_ :     (ALA8)  (ASP191)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d2j5id_ :    (THR10)  (PRO193)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2a7kf_ :     (MET1)  (GLU180)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Carbapenem biosynthes protein CarB |Pectobacterium carotovorum [TaxId: 554]
 d2a7ke_ :     (MET1)  (GLU180)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Carbapenem biosynthes protein CarB |Pectobacterium carotovorum [TaxId: 554]
 d3pzkc_ :     (ILE6)  (PRO181)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3q0gf_ :     (ILE6)  (PRO181)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2a7kb_ :     (MET1)  (GLU180)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Carbapenem biosynthes protein CarB |Pectobacterium carotovorum [TaxId: 554]
 d3hp0b_ :     (THR8)  (ALA186)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d2a7kc_ :     (MET1)  (GLU180)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Carbapenem biosynthes protein CarB |Pectobacterium carotovorum [TaxId: 554]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14