Protein Concepts Dictionary

Tableau information

Concept source:  d1ngfa2  amino acid (a.a.) range (ALA191)(LEU380)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EEEHHHEEHHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA191)  (GLY201) E1
	  (GLY203)  (ASP214) E2
	  (ILE216)  (HIS227) E3
	  (GLY230)  (LYS250) H4
	  (ASN256)  (THR273) H5
	  (THR273)  (THR278) H6
	  (THR278)  (ILE284) E7
	  (ASP292)  (THR298) E8
	  (THR298)  (ASN306) H9
	  (ASN306)  (GLY312) H10
	  (LEU314)  (LYS325) H11
	  (HIS332)  (GLY338) E12
	  (GLY338)  (PRO344) H13
	  (PRO344)  (ASN355) H14
	  (LYS357)  (ILE363) E15
	  (ALA368)  (LEU380) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
E2      167.2°   E2                                                                                                       
E3      -22.1°  170.3°   E3                                                                                                
H4      -28.2° -157.5°   18.5°   H4                                                                                         
H5      142.0°  -38.2°  136.0°  119.3°   H5                                                                                  
H6       96.0°  -89.5°   83.2°   68.5°   53.3°   H6                                                                           
E7      -33.0°  138.7°  -50.4°  -61.1°  156.0°  128.5°   E7                                                                    
E8      153.8°  -37.6°  132.7°  126.5°  -34.7°  -62.3°  166.5°   E8                                                             
H9      102.1°  -83.9°   95.2°  112.6° -113.9° -125.6°   84.8°  -81.9°   H9                                                      
H10     158.0°  -22.2°  156.9°  168.7°  -58.8° -105.7°  125.8°  -44.8°   62.2°   H10                                              
H11     151.9°  -31.0°  147.6°  161.9°  -66.0° -109.2°  122.0°  -46.9°  -53.0°    9.3°   H11                                       
E12     -21.8°  146.1°  -43.5°  -48.4° -142.9°  112.1°   18.1° -174.5°  102.0°  140.6°  138.6°   E12                                
H13      91.3°  -93.8°   79.2°   64.1°   57.0°    4.8° -123.8°  -67.1° -128.2° -110.4° -114.0° -107.4°   H13                         
H14     149.8°  -42.9°  128.5°  130.5°  -53.9°  -77.1° -146.7°   20.0°  -61.9°  -38.5°  -36.2°  163.1°  -81.8°   H14                  
E15     -63.3°  104.0°  -85.4°  -85.3° -112.3° -124.1°   44.5° -140.1°  109.8°  105.8°  109.3°  -42.4° -120.7°  144.2°   E15           
H16    -128.9°   40.8° -148.3° -154.3°  -73.3° -126.3°   97.9°  -77.3°  -77.4°   36.8°   41.6° -107.3°  129.6°  -75.2°   69.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ngca2 :   (ALA191)  (SER381)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1ba0a2 :   (ALA191)  (ALA368)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d2qwpa2 :   (ALA191)  (ALA368)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1ngda2 :   (ALA191)  (LEU380)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1atra2 :   (GLY203)  (GLY382)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d2qwoa2 :   (ALA191)  (ALA368)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d3ldna2 :   (ASN219)  (SER406)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ngfa2 :   (ALA191)  (LEU380)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d4fsva2 :   (GLY206)  (LEU383)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55