Tableau information
Concept source: d1m2ta_ amino acid (a.a.) range (VAL54)(ASN232)
nSSEs in this Concept: 16
String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHEHHHEHHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL54) (ASN60) E1
(ASP64) (ALA69) E2
(VAL78) (GLY83) E3
(ASN84) (LEU89) E4
(GLY95) (ASP100) H5
(THR105) (PHE111) E6
(SER114) (GLY123) H7
(GLN127) (ILE132) E8
(ILE132) (ARG143) H9
(GLN148) (PHE169) H10
(PHE169) (SER182) H11
(ALA184) (PRO188) E12
(TYR191) (THR197) H13
(SER198) (SER209) H14
(ASN215) (ALA221) E15
(VAL226) (ASN232) E16
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 165.5° E2
E3 -45.7° 148.7° E3
E4 118.5° -47.1° 161.4° E4
H5 -58.9° 131.6° -39.2° 149.5° H5
E6 91.9° -73.6° 136.8° -26.7° 133.6° E6
H7 -22.8° 153.0° -47.5° 114.0° -75.0° 90.7° H7
E8 84.4° -106.0° 58.6° -137.2° 25.7° -138.6° 100.2° E8
H9 -99.7° 89.5° -67.2° 113.4° -96.5° 125.5° 81.9° -95.6° H9
H10 116.7° -62.3° 118.7° -75.4° 79.7° -84.0° -139.2° -61.8° -132.9° H10
H11 17.8° -174.2° -30.2° 135.8° -42.8° 109.1° 32.7° -68.5° -92.9° -112.5° H11
E12 -142.1° 28.8° -146.3° -36.7° 158.9° -60.7° -124.2° 133.5° -79.6° 87.9° -157.0° E12
H13 -149.3° 43.9° 105.2° -87.6° 107.1° -113.9° 134.1° 86.3° -52.2° 83.8° -135.4° -54.2° H13
H14 142.9° -37.7° 131.8° -66.3° 97.6° -85.2° 165.2° -74.1° -112.0° 26.2° -136.7° 65.6° -60.1° H14
E15 -11.0° 158.2° -50.2° 112.3° -69.1° 86.6° 13.8° -94.8° 95.1° -125.5° -26.6° 131.6° 147.1° -151.3° E15
E16 146.6° -45.8° 107.4° -90.8° 87.8° -115.1° 154.0° 62.4° -80.8° 52.3° 129.5° -71.2° -33.8° -34.1° 156.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3bwha_ : (ILE48) (ASN225) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Cushaw squash (Cucurbita moschata) [TaxId: 3662]
d1gisa_ : (ARG47) (ASN228) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |alpha-Trichosanthin |Mongolian snake gourd (Trichosanthes kirilowii Maxim.) [TaxId: 3677]
d2zr1a_ : (GLN49) (SER229) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Abrus precatorius [TaxId: 3816]
d2q3na1 : (GLN49) (SER229) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Agglutinin-1 chain A |Abrus precatorius [TaxId: 3816]
d2q8wa_ : (LYS48) (LEU239) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Phytolacca acinosa
d2qesa_ : (VAL50) (ARG240) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |automated matches |Phytolacca dioica [TaxId: 29725]
d1m2ta_ : (VAL54) (ASN232) [view usage] : d.165.1.1 |Ribosome inactivating proteins (RIP) |Ribosome inactivating proteins (RIP) |Plant cytotoxins |Mistletoe lectin I A-chain |European mistletoe (Viscum album) [TaxId: 3972]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.165