Protein Concepts Dictionary

Tableau information

Concept source:  d3idza_  amino acid (a.a.) range (MET1)(GLU167)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHEHHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MET1)    (GLY7) E1
	   (SER15)   (ALA21) E2
	   (ARG24)   (ASP29) E3
	   (CYS30)   (GLY35) E4
	   (GLU38)   (HIS42) H5
	   (ASP53)   (HIS59) E6
	   (PRO69)   (GLY75) H7
	   (GLY78)   (THR83) E8
	   (THR83)  (VAL100) H9
	  (PRO108)  (LEU118) H10
	  (ARG119)  (TYR123) E11
	  (GLU125)  (GLY130) E12
	  (ALA131)  (PHE136) E13
	  (PHE147)  (GLY152) E14
	  (ARG155)  (GLY161) E15
	  (GLY161)  (GLU167) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
E2      162.9°   E2                                                                                                       
E3      -31.9°  165.2°   E3                                                                                                
E4      -29.3° -151.4°   34.6°   E4                                                                                         
H5      112.8°   51.1° -142.6° -126.8°   H5                                                                                  
E6      -56.7°  140.3°  -24.9°   50.9° -163.9°   E6                                                                           
H7      106.9°  -56.5°  137.9°  119.3°   -7.6° -161.8°   H7                                                                    
E8      -83.6°  113.5°  -51.7°  -76.2° -155.7°  -27.3° -163.1°   E8                                                             
H9       31.9° -131.4°   63.0°   42.9°  -85.6°   87.1°  -78.6°  114.4°   H9                                                      
H10    -149.2°   47.5° -117.9° -137.1°   94.0°  -93.7°  100.9°  -66.4°  178.4°   H10                                              
E11    -107.1°   88.1°  -78.6°  -85.3°  138.8°  -55.6°  142.6°  -37.4°  127.6°   52.2°   E11                                       
E12     110.8°  -53.2°  140.0° -107.5°   34.0° -156.2°   30.0° -157.4°  -78.9°   99.9° -120.0°   E12                                
E13     -44.4°  152.1°   14.6°   48.7° -147.1°   17.0° -145.0°  -40.2°   76.3° -104.8°  -72.4°  154.5°   E13                         
E14     144.8°   19.2° -170.5° -136.5°   40.4°  154.6°   43.5°  130.2° -112.9°   66.0°   99.1°  -34.1°  170.5°   E14                  
E15      19.0° -166.2°   22.7°   41.2° -120.2°  -45.7°  116.2°  -70.2°   49.3° -132.0° -100.9°  127.5°  -30.1°  159.3°   E15           
E16     -74.3°  122.8°   42.5°   68.0° -161.3°   18.1° -167.2°   -9.3°  105.2°  -75.7°  -43.6° -162.0°   31.2° -139.3°  -61.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ie1a_ :     (MET1)  (GLU167)   [view usage] : d.157.1.10 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |beta-CASP RNA-metabolising hydrolases |Putative RNA-degradation protein TTHA0252 |Thermus thermophilus [TaxId: 274]
 d2dkfa1 :     (MSE1)  (GLU167)   [view usage] : d.157.1.10 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |beta-CASP RNA-metabolising hydrolases |Putative RNA-degradation protein TTHA0252 |Thermus thermophilus [TaxId: 274]
 d3idza_ :     (MET1)  (GLU167)   [view usage] : d.157.1.10 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |beta-CASP RNA-metabolising hydrolases |Putative RNA-degradation protein TTHA0252 |Thermus thermophilus [TaxId: 274]
 d3ie0a_ :     (MET1)  (TYR189)   [view usage] : d.157.1.10 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |beta-CASP RNA-metabolising hydrolases |Putative RNA-degradation protein TTHA0252 |Thermus thermophilus [TaxId: 274]
 d3ieka_ :     (MET1)  (GLU167)   [view usage] : d.157.1.10 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |beta-CASP RNA-metabolising hydrolases |Putative RNA-degradation protein TTHA0252 |Thermus thermophilus [TaxId: 274]
 d3ie2a_ :     (MET1)  (TYR189)   [view usage] : d.157.1.10 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |beta-CASP RNA-metabolising hydrolases |Putative RNA-degradation protein TTHA0252 |Thermus thermophilus [TaxId: 274]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157