Protein Concepts Dictionary

Tableau information

Concept source:  d2w41b1  amino acid (a.a.) range (ILE4)(PHE206)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHEEHHHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE4)   (SER10) E1
	   (SER13)   (PHE18) E2
	   (VAL26)   (ASN32) E3
	   (GLN35)   (LYS39) E4
	   (GLY41)   (ASP46) E5
	   (ASP46)   (LYS68) H6
	   (THR70)   (ASN81) E7
	   (THR85)   (TRP89) E8
	  (VAL108)  (LYS118) H9
	  (ASN121)  (LYS127) H10
	  (ALA138)  (GLN146) H11
	  (PRO149)  (GLY158) H12
	  (THR159)  (ASN164) E13
	  (ASN164)  (LYS175) H14
	  (VAL182)  (THR188) H15
	  (GLU200)  (PHE206) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
E2      171.6°   E2                                                                                                       
E3      -22.2°  166.1°   E3                                                                                                
E4      -20.4°  162.2°  -19.6°   E4                                                                                         
E5      142.8°  -45.1°  122.1°  135.6°   E5                                                                                  
H6      148.7°  -28.1°  154.1°  169.1°   50.5°   H6                                                                           
E7      -35.3°  141.4°  -45.3°  -25.9° -150.6°  154.3°   E7                                                                    
E8      100.5°  -87.7°   78.4°   87.1°  -49.3°  -99.7° -103.1°   E8                                                             
H9      -87.5°   89.6°   93.5°  -74.6°  115.6° -112.2°  -52.2°  100.0°   H9                                                      
H10     169.1°  -16.2°  152.2°  163.6°   30.3°  -26.1°  155.6°   77.1°  103.4°   H10                                              
H11      60.5° -127.9°   38.4°   52.5°  -84.2° -129.3°  -76.3°  -41.5°  106.9°  114.4°   H11                                       
H12    -138.8°   42.3°  131.5° -120.0°   61.3°   70.4° -105.2°   73.0°  -55.3°   51.1° -110.2°   H12                                
E13     -89.9°   82.3° -111.2° -105.7°  116.7°   66.5°   91.6°  165.1°  -91.1°  -90.6°  143.6° -106.0°   E13                         
H14     131.2°  -56.8°  110.3°  124.5°  -11.8°  -60.5° -143.1°   40.0°  120.1°   42.0°  -72.6°   68.7° -125.3°   H14                  
H15      12.7°  168.3°  -19.0°   -7.8° -139.9°  161.4°   27.5°  -92.8°   78.8°  169.9°  -55.8° -126.9°   99.3° -128.3°   H15           
H16      38.4° -146.8°   29.5°   48.0° -106.8°  124.6°   71.8°  -79.5°  122.6° -131.2°  -40.7° -150.9°  103.0°  -96.0°   44.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2w41a1 :     (ILE4)  (PHE206)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d2w41b1 :     (ILE4)  (PHE206)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d2w40c1 :     (SER0)  (LEU196)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d2w40b1 :     (ILE4)  (PHE206)   [view usage] : c.55.1.0 |Ribonuclease H-like motif |Actin-like ATPase domain |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55