Protein Concepts Dictionary

Tableau information

Concept source:  d3t0aa5  amino acid (a.a.) range (CYS825)(GLN1022)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEHEHEEEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (CYS825)  (THR829) E1
	  (VAL834)  (HIS844) E2
	  (LEU849)  (ASP859) E3
	  (GLY862)  (ALA873) E4
	  (GLY883)  (GLN887) E5
	  (GLU893)  (LEU898) E6
	  (LEU910)  (ALA913) H7
	  (ARG917)  (PRO921) E8
	  (PRO921)  (THR927) H9
	  (GLY936)  (GLY940) E10
	  (ARG942)  (TYR946) E11
	  (PRO948)  (GLY953) E12
	  (PHE955)  (ARG961) E13
	  (SER963)  (GLU969) H14
	  (THR982)  (GLY988) E15
	 (GLY1012) (GLN1022) E16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
E2      171.1°   E2                                                                                                       
E3      -18.8°  166.2°   E3                                                                                                
E4      147.0°  -28.1°  165.5°   E4                                                                                         
E5      -84.8°  102.1°  -66.1°  127.5°   E5                                                                                  
E6       73.6°  -99.4°   92.3°  -74.1°  158.4°   E6                                                                           
H7       11.2° -160.0°   27.3° -139.9°   92.6°  -65.8°   H7                                                                    
E8     -122.8°   64.5° -104.2°   89.4°  -38.1°  163.5°  130.6°   E8                                                             
H9      139.3°  -35.0°  158.1°   -8.1° -135.5°   66.1° -131.8°   97.4°   H9                                                      
E10      50.4° -123.5°   69.1°  -96.6°  134.2°   25.1°  -44.9° -167.5°   88.9°   E10                                              
E11     -94.8°   92.5°  -76.2°  117.0°  -10.7°  167.9°  103.0°  -28.1° -125.1°  142.8°   E11                                       
E12     102.5°  -70.9°  121.3°  -44.9° -172.3°  -29.2°  -95.0°  134.4°   36.9°  -52.7°  161.6°   E12                                
E13    -108.0°   78.5°  -89.1°  104.9°  -23.7° -174.1°  114.8°  -16.4° -112.7°  157.9°   15.9°  149.4°   E13                         
H14     153.1°  -22.9°  145.3°  -46.8°   92.9° -105.9°  144.7°   60.6°  -51.6° -130.8°   85.9°  -81.6°   70.0°   H14                  
E15      85.6°  -88.0°  104.5°  -61.5°  168.9°  -13.7°  -78.8°  150.5°   53.7°  -35.5° -170.2°   17.2°  166.4°  -98.2°   E15           
E16     -49.1°  136.2°  -30.4°  163.9°  -37.1°  121.6°   55.8°  -74.8° -171.1°   99.5°  -47.7°  150.6°  -59.1°  119.8°  134.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3sepa5 :   (CYS825) (GLN1022)   [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3t0aa5 :   (CYS825) (GLN1022)   [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1px4a4 :   (ALA818) (GLN1022)   [view usage] : b.30.5.1 |Supersandwich |Galactose mutarotase-like |beta-Galactosidase, domain 5 |beta-Galactosidase, domain 5 |Escherichia coli [TaxId: 562]
 d1bgla4 :   (GLU819) (GLN1022)   [view usage] : b.30.5.1 |Supersandwich |Galactose mutarotase-like |beta-Galactosidase, domain 5 |beta-Galactosidase, domain 5 |Escherichia coli [TaxId: 562]
 d3i3eb5 :   (CYS825) (GLN1022)   [view usage] : b.30.5.1 |Supersandwich |Galactose mutarotase-like |beta-Galactosidase, domain 5 |beta-Galactosidase, domain 5 |Escherichia coli [TaxId: 562]
 d3t2oa5 :   (CYS825) (GLN1022)   [view usage] : b.30.5.0 |Supersandwich |Galactose mutarotase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.30