Protein Concepts Dictionary

Tableau information

Concept source:  d1w6fb_  amino acid (a.a.) range (GLU87)(VAL272)

nSSEs in this Concept: 16

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEHHHEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU87)   (MET98) E1
	  (HIS110)  (ALA116) E2
	  (GLY122)  (VAL128) E3
	  (PRO145)  (ARG150) E4
	  (PRO153)  (GLY160) E5
	  (ASP162)  (GLN168) E6
	  (GLU172)  (GLU182) E7
	  (ARG186)  (SER197) H8
	  (HIS199)  (SER202) H9
	  (SER202)  (GLY207) H10
	  (GLY207)  (VAL213) E11
	  (ARG218)  (GLY223) E12
	  (ARG224)  (ARG230) E13
	  (THR234)  (ASP240) E14
	  (ALA242)  (GLY254) H15
	  (VAL265)  (VAL272) H16

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                              
E2      141.3°   E2                                                                                                       
E3      -58.6°  145.3°   E3                                                                                                
E4      -94.1°  101.7°  -43.6°   E4                                                                                         
E5       95.7°  -91.6°  117.7°  144.5°   E5                                                                                  
E6      -64.9°   98.5°  -61.0°  -51.2°  158.7°   E6                                                                           
E7      139.9°  -67.8°  117.0°  106.9°  -48.3°  152.9°   E7                                                                    
H8       30.4° -152.1°  -28.9°  -65.1°  113.6°  -53.8°  138.2°   H8                                                             
H9       80.7°  -88.2°  -64.7°  -41.4°  173.8°   16.2° -136.7°  -65.5°   H9                                                      
H10      69.8° -124.0°  -22.4°  -24.8°  139.2°   44.8° -122.8°  -40.4°  -44.2°   H10                                              
E11     119.3°  -29.3° -124.9°   86.7° -117.2°   69.6°  -96.1°  122.8°   61.1° -102.7°   E11                                       
E12     -63.4°  154.6°   40.8°   77.1°   77.0° -100.1°   88.0°  -50.4°  105.6°   62.3°  163.8°   E12                                
E13     106.8°  -34.7° -138.7° -108.4°  101.2°   77.7°  -98.6°  123.1°  -75.2° -119.4°  -23.9°  169.5°   E13                         
E14     -81.8°  135.4°   33.0°   53.2°  -94.7°   91.3°   84.1°  -57.7°   89.9°   46.7°  137.3°  -27.5°  160.9°   E14                  
H15     145.7°    6.2° -139.8°   96.1°  -94.7°   97.2°  -66.6°  150.9°   85.6° -119.0°   29.5° -150.9°   39.0°  129.7°   H15           
H16      42.4° -104.2° -101.0° -130.4°   75.9°  -83.4°  121.9°   72.4°  -98.1°  109.2°  -96.0°   95.1°   74.5° -120.2°  110.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1w6fd_ :    (GLU87)  (VAL272)   [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |Arylamine N-acetyltransferase |Mycobacterium smegmatis [TaxId: 1772]
 d1gx3a_ :    (GLU87)  (VAL272)   [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |Arylamine N-acetyltransferase |Mycobacterium smegmatis [TaxId: 1772]
 d1w6fb_ :    (GLU87)  (VAL272)   [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |Arylamine N-acetyltransferase |Mycobacterium smegmatis [TaxId: 1772]
 d4b55a_ :   (THR109)  (GLY261)   [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |automated matches |Mycobacterium marinum [TaxId: 1781]
 d1w6fc_ :    (GLU87)  (THR275)   [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |Arylamine N-acetyltransferase |Mycobacterium smegmatis [TaxId: 1772]
 d1gx3b_ :    (GLU87)  (VAL272)   [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |Arylamine N-acetyltransferase |Mycobacterium smegmatis [TaxId: 1772]
 d1w6fa_ :    (GLU87)  (VAL272)   [view usage] : d.3.1.5 |Cysteine proteinases |Cysteine proteinases |Arylamine N-acetyltransferase |Arylamine N-acetyltransferase |Mycobacterium smegmatis [TaxId: 1772]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.3