Protein Concepts Dictionary

Tableau information

Concept source:  d1pqpa2  amino acid (a.a.) range (SER136)(ASP352)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HHEHHHEHEEHEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER136)  (GLY146) H1
	  (GLY146)  (ASP152) H2
	  (GLU155)  (ALA165) E3
	  (GLY169)  (ALA186) H4
	  (VAL187)  (ASP193) H5
	  (ILE198)  (ALA211) H6
	  (GLY225)  (TRP230) E7
	  (THR241)  (GLY256) H8
	  (ILE262)  (GLY272) E9
	  (ARG275)  (LYS287) E10
	  (PRO290)  (HIS301) H11
	  (TRP304)  (ASN310) E12
	  (LYS312)  (GLU318) H13
	  (LEU328)  (GLY333) E14
	  (GLU343)  (ASP352) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
H2      -74.7°   H2                                                                                                
E3      124.9° -153.9°   E3                                                                                         
H4      -88.1°  136.2°  -66.9°   H4                                                                                  
H5      -31.3°  101.6° -102.8°   57.2°   H5                                                                           
H6      129.1°  -65.6°   88.3°  142.8° -159.9°   H6                                                                    
E7      -97.3°  -23.6°  131.2°  145.9°  125.1°  -43.2°   E7                                                             
H8      -48.2°  -53.5°  123.7° -134.6°  -77.8°   82.0°  -65.4°   H8                                                      
E9      117.3° -168.0°  -18.4°   48.5°  -89.8°  104.4°  144.9°  134.1°   E9                                               
E10     -52.3°   32.8°  173.1°  106.2°   71.9°  -98.1°  -55.0°  -60.3°  154.7°   E10                                       
H11     121.3°  100.4°  -55.8° -122.6° -131.1°   44.0°   83.0°   81.3°  -74.2°  131.1°   H11                                
E12     -70.6° -104.2°   99.2°   32.4°   47.4° -147.9° -119.1° -117.5°   80.8°  -74.0° -155.0°   E12                         
H13     138.1°  -96.8°  -57.2° -121.2° -148.6°   32.4°   75.3°   93.4°  -74.7°  129.5°   18.5° -149.0°   H13                  
E14     -64.5°  -79.6°  122.9°   56.8°   54.3° -132.2°  -95.3° -103.2°  104.7°  -50.5°  174.1°  -24.6° -155.7°   E14           
E15     121.7° -132.3°  -25.4°  -91.1° -112.4°   71.5°  113.7°  101.4°  -43.3°  160.7°  -31.8°  123.4°  -39.3°  147.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gl3a2 :   (ASN134)  (GLY348)   [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Escherichia coli [TaxId: 562]
 d1pqpa2 :   (SER136)  (ASP352)   [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Haemophilus influenzae [TaxId: 727]
 d1pqua2 :   (CYS136)  (ASP352)   [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Haemophilus influenzae [TaxId: 727]
 d1nwca2 :   (CYS136)  (ASP352)   [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Haemophilus influenzae [TaxId: 727]
 d1ps8a2 :   (CYS136)  (ASP352)   [view usage] : d.81.1.1 |FwdE/GAPDH domain-like |Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |GAPDH-like |Aspartate beta-semialdehyde dehydrogenase |Haemophilus influenzae [TaxId: 727]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.81