Protein Concepts Dictionary

Tableau information

Concept source:  d3wlxb_  amino acid (a.a.) range (SER13)(LEU195)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHHEHEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER13)   (ALA23) H1
	   (PRO34)   (SER47) H2
	   (GLU50)   (PRO56) E3
	   (THR57)   (SER68) H4
	   (GLY73)   (ILE77) E5
	   (ALA82)   (GLU88) H6
	   (GLY91)   (SER97) H7
	   (GLN99)  (ASP104) E8
	  (LEU113)  (ILE120) H9
	  (HIS126)  (THR138) E10
	  (ARG146)  (ARG159) H11
	  (ALA162)  (ALA168) E12
	  (ILE170)  (GLY178) H13
	  (GLU180)  (GLN186) H14
	  (ASP189)  (LEU195) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
H2      121.1°   H2                                                                                                
E3     -103.4°  129.4°   E3                                                                                         
H4       59.7°  -64.2°  135.5°   H4                                                                                  
E5      151.6°   56.7°  -94.9°  119.2°   E5                                                                           
H6      -80.9°  139.5°   25.3° -113.2° -120.0°   H6                                                                    
H7       15.5° -111.9°  105.1°  -47.9°  159.2°   80.3°   H7                                                             
E8      164.7°   54.6°  -87.8°  118.8°  -13.4° -111.9°  166.1°   E8                                                      
H9      -39.7° -108.9°   89.5°  -50.1°  163.8°   64.7°  -26.4°  152.9°   H9                                               
E10     123.3°   92.9°  -80.5°  143.9°  -38.6°  102.4°  138.7°  -47.5°  157.4°   E10                                       
H11     -37.9°  -94.9°  108.3°  -32.3°  151.2°   83.5°  -22.5°  147.7°  -18.8° -159.8°   H11                                
E12    -119.6°  116.6°  -44.1°  179.2°  -61.6°   66.3°  131.3°  -62.0°  129.2°  -36.5°  147.0°   E12                         
H13     124.4°   40.2° -127.5°   90.8°   32.6°  152.6° -127.0°   41.6° -140.9°   56.7° -122.4°   89.8°   H13                  
H14     -76.7°  -72.4°   98.0°  -40.6°  122.5°  -81.9°  -61.2°  112.5°  -41.4°  159.9°   39.2°  139.4°  112.0°   H14           
E15    -109.5°  127.2°  -39.8°  168.6°  -71.8°   59.1°  120.8°  -72.5°  119.8°  -43.3°  136.9°  -10.6°  -98.8°  137.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3wlxa_ :    (SER13)  (LEU195)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d1v72a1 :    (SER21)  (ALA210)   [view usage] : c.67.1.1 |PLP-dependent transferase-like |PLP-dependent transferases |AAT-like |Phenylserine aldolase PSALD |Pseudomonas putida [TaxId: 303]
 d4lnja_ :    (SER13)  (LEU195)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 945433]
 d3wlxb_ :    (SER13)  (LEU195)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d4lnma_ :    (SER13)  (LEU195)   [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Escherichia coli [TaxId: 945433]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.67