Protein Concepts Dictionary

Tableau information

Concept source:  d2asda2  amino acid (a.a.) range (TYR48)(ASP231)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HHEHEEHEHEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR48)   (GLY54) H1
	   (ILE61)   (ILE67) H2
	   (ALA71)   (PRO75) E3
	   (GLU79)   (SER96) H4
	   (LYS98)  (SER103) E5
	  (ASP105)  (ASP110) E6
	  (TYR118)  (GLU134) H7
	  (LYS137)  (SER145) E8
	  (LYS148)  (ALA158) H9
	  (GLY162)  (ASP167) E10
	  (ASP167)  (GLU177) H11
	  (ASN188)  (GLY198) H12
	  (LYS201)  (SER207) H13
	  (PHE210)  (MET216) H14
	  (GLU219)  (ASP231) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
H2       91.2°   H2                                                                                                
E3     -110.9° -157.4°   E3                                                                                         
H4     -107.8°   90.8°  -86.8°   H4                                                                                  
E5       59.7°  -79.9° -106.8°  163.9°   E5                                                                           
E6     -100.6°  103.1°   77.9°  -14.0°  160.3°   E6                                                                    
H7      110.9°  -84.9°   83.0°  141.1°  -51.7°  147.3°   H7                                                             
E8      -61.8°  109.5°  -85.9°  -50.0°  120.9°  -39.5°  163.3°   E8                                                      
H9      -87.7°  -29.1°  142.4°  119.3°  -53.8°  132.2°  -59.6°  131.3°   H9                                               
E10      73.4°  113.9°  -78.2°  -41.4°  131.8°  -29.3°  160.9°   12.0°  139.3°   E10                                       
H11      25.3°   97.5° -100.8° -131.9°   38.5° -122.4°   87.0°  -82.9°   82.0°  -93.3°   H11                                
H12     -45.2°   81.9°  116.6°   63.8° -101.6°   60.3° -152.1°   31.8°  -99.8°   42.1°  -70.6°   H12                         
H13      58.8°  140.2°  -60.6°  -76.4°  102.5°  -62.6°  128.1°  -35.3°  146.4°  -37.2°  -67.1°   58.5°   H13                  
H14      99.5°   89.2°  -82.9° -152.7°   41.3° -156.1°  -12.2° -152.9°   61.4° -155.6°   75.1°  142.9°  119.1°   H14           
H15    -108.7°  -48.9°  122.9°   42.2° -128.4°   55.5° -118.3°   78.3°  -77.1°   75.6° -130.3°  -69.4° -112.6°  128.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2jeia2 :    (PRO60)  (ASP231)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
 d2j6ua2 :    (TYR51)  (ASP234)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
 d1jxla2 :    (TYR48)  (ASP231)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
 d3pr4a1 :    (TYR48)  (ASP231)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
 d2asda2 :    (TYR48)  (ASP231)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
 d2agoa2 :    (PRO60)  (ASP231)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]
 d2jefa2 :    (PRO60)  (ASP231)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |automated matches |Sulfolobus solfataricus [TaxId: 273057]
 d1jx4a2 :    (TYR48)  (ASP231)   [view usage] : e.8.1.7 |DNA/RNA polymerases |DNA/RNA polymerases |Lesion bypass DNA polymerase (Y-family), catalytic domain |DinB homolog (DBH) |Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8