Protein Concepts Dictionary

Tableau information

Concept source:  d3kzlc_  amino acid (a.a.) range (PRO86)(LYS263)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HHEEHHEHEEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO86)   (ASN96) H1
	  (GLY111)  (TYR120) H2
	  (ASN122)  (SER126) E3
	  (GLY131)  (GLY137) E4
	  (HIS139)  (VAL145) H5
	  (PRO158)  (ASP166) H6
	  (TYR168)  (GLY173) E7
	  (GLY175)  (SER189) H8
	  (ALA191)  (PRO200) E9
	  (TRP209)  (VAL213) E10
	  (VAL213)  (SER219) E11
	  (LYS221)  (GLN231) H12
	  (THR234)  (LYS239) E13
	  (ALA243)  (LYS249) E14
	  (LYS249)  (LYS263) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
H2       17.7°   H2                                                                                                
E3     -122.4° -111.1°   E3                                                                                         
E4       43.5°   60.1°  151.8°   E4                                                                                  
H5     -122.5° -106.8°   21.1° -165.0°   H5                                                                           
H6       70.2°   87.1°  114.6°   42.7°  135.6°   H6                                                                    
E7      136.7°  133.6°  -94.4°  110.8°  -83.4° -117.4°   E7                                                             
H8      -76.3°  -69.9°   47.5° -108.0°   58.2°  -90.1° -141.2°   H8                                                      
E9      -64.0°  -52.8° -112.4°  -84.4°  -93.1° -126.6°   82.1° -103.9°   E9                                               
E10     104.7°  115.7°   70.6°   88.7°   91.2°   46.1° -109.0°   69.5°  168.5°   E10                                       
E11     119.9°  135.6°  111.6°   76.5° -117.4°   64.7°  -53.0°  138.2°  117.8°   69.1°   E11                                
H12      73.9°   90.9°  115.1°  -43.8°  136.1°    4.5° -113.0°   93.5° -128.2°   45.4°  -60.3°   H12                         
E13      99.2°   99.2° -127.2°   80.9° -110.0°  109.0°  -37.5°  157.9°   55.9° -132.0°  -62.8° -106.1°   E13                  
E14     -57.7°  -57.9°   70.7°  -83.2°   83.3°  -68.7°  164.9°   25.1° -105.8°   64.1°  129.0°   72.7°  156.7°   E14           
H15    -137.7° -126.4°  -15.5° -156.5°   25.9° -114.1°   81.2°  -61.9°  118.0°  -68.0°   97.1°  113.3° -116.7°   83.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3e4fb_ :    (PRO86)  (LYS264)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d2nyga1 :    (TRP91)  (ASN270)   [view usage] : c.140.1.2 |TTHA0583/YokD-like |TTHA0583/YokD-like |Aminoglycoside 3-N-acetyltransferase-like |Uncharacterized protein YokD |Bacillus subtilis [TaxId: 1423]
 d3kzlc_ :    (PRO86)  (LYS263)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3kzla_ :    (PRO86)  (LYS263)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3n0sc_ :    (PRO86)  (LYS263)   [view usage] : c.140.1.0 |TTHA0583/YokD-like |TTHA0583/YokD-like |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.140