Protein Concepts Dictionary

Tableau information

Concept source:  d1uc2a_  amino acid (a.a.) range (SER275)(GLU446)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HHEEEEHEEHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER275)  (LYS312) H1
	  (ASP314)  (GLY320) H2
	  (TYR325)  (ASN330) E3
	  (ASN330)  (VAL334) E4
	  (ILE347)  (GLY352) E5
	  (GLY352)  (PRO358) E6
	  (ARG369)  (GLY372) H7
	  (GLN373)  (GLY379) E8
	  (THR383)  (GLU392) E9
	  (GLU392)  (GLU397) H10
	  (GLY400)  (ALA406) E11
	  (SER411)  (GLN418) H12
	  (ARG420)  (GLY432) H13
	  (GLY432)  (ARG436) E14
	  (MET440)  (GLU446) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
H2       81.1°   H2                                                                                                
E3      139.8°  106.0°   E3                                                                                         
E4     -124.3°  -86.9°  -95.8°   E4                                                                                  
E5       42.7°   79.4°  -98.7°  162.3°   E5                                                                           
E6      -84.2°  -60.8°  134.4°   43.8°  118.7°   E6                                                                    
H7      123.0°   55.2°  -50.9°  -90.9°   90.4° -100.8°   H7                                                             
E8       75.8°   97.8°  -64.1° -159.9°  -35.8° -153.0°   76.2°   E8                                                      
E9     -126.6°  -77.2°   93.2°  -11.1°  155.9°  -42.7°  -81.0°  154.8°   E9                                               
H10     155.6°  106.1°   16.0°  -79.8°  114.6° -119.9°  -52.8°   80.1°  -77.8°   H10                                       
E11      58.7°  103.7°  -81.4°  169.4°  -26.8°  142.4°   95.1°   20.1°  174.6°   96.9°   E11                                
H12      30.7°   80.3° -110.2°  153.3°   12.1°  109.9°  100.5°   46.4°  151.2°  126.2°  -33.1°   H12                         
H13     -54.4°   50.5°  155.0°   76.3°   86.3°  -32.5°  104.9°  121.6°   74.4°  147.0°  110.4°   77.5°   H13                  
E14     114.6° -164.3°  -62.5°   83.9° -111.9°  118.2° -112.2°  -86.9°   92.2°  -59.8°  -85.8° -113.1° -137.9°   E14           
H15    -110.0°  -30.0°   88.3°  -64.3° -105.9°  -58.3°   42.7° -112.0°   53.4°   82.5° -125.5°  109.1°   66.8°  134.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4dwrb_ :   (SER275)  (LYS452)   [view usage] : d.261.1.1 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |automated matches |Pyrococcus horikoshii [TaxId: 53953]
 d4dwqa_ :   (SER275)  (ALA447)   [view usage] : d.261.1.1 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |Pyrococcus horikoshii [TaxId: 53953]
 d4dwra_ :   (SER275)  (GLU446)   [view usage] : d.261.1.1 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |automated matches |Pyrococcus horikoshii [TaxId: 53953]
 d1uc2a_ :   (SER275)  (GLU446)   [view usage] : d.261.1.1 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |Hypothetical protein PH1602 |Pyrococcus horikoshii [TaxId: 53953]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.261