Protein Concepts Dictionary

Tableau information

Concept source:  d3b1nb_  amino acid (a.a.) range (GLN124)(ALA306)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHHEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLN124)  (ASN128) H1
	  (LYS137)  (PRO143) E2
	  (GLY145)  (GLY160) H3
	  (PRO162)  (GLY168) E4
	  (GLY168)  (LEU173) H5
	  (GLY176)  (ALA186) H6
	  (THR187)  (ASN192) E7
	  (ASN192)  (LYS202) H8
	  (SER206)  (SER212) H9
	  (LEU217)  (GLY222) E10
	  (ALA226)  (HIS230) E11
	  (GLY233)  (ALA239) E12
	  (GLY250)  (GLY266) H13
	  (ASP268)  (GLN287) H14
	  (THR295)  (ALA306) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
E2     -172.7°   E2                                                                                                
H3      -15.0° -158.1°   H3                                                                                         
E4      167.5°  -12.8° -162.0°   E4                                                                                  
H5     -120.1°   57.4° -109.2°  -70.2°   H5                                                                           
H6       20.6° -161.7°   33.6° -149.1°  140.6°   H6                                                                    
E7      140.1°  -41.0°  144.9°  -28.3°  -98.4° -120.7°   E7                                                             
H8      -94.3°   81.7°  -81.9°   94.2°   27.9° -114.9°  120.5°   H8                                                      
H9      -41.0°  144.5°   49.8°  148.1°  102.5°  -48.1° -144.0°   89.9°   H9                                               
E10     125.9°  -57.5°  136.3°  -45.0° -113.9°  105.3°  -20.5° -139.2°  123.9°   E10                                       
E11     -47.7°  128.2°  -36.3°  140.2°   73.0°  -68.3°  160.1°   46.7°  -55.8°  172.0°   E11                                
E12     119.7°  -65.8°  133.7°  -55.1° -115.2°  100.1°  -37.8° -143.1°  106.2°  -19.6°  162.0°   E12                         
H13     -12.6°  162.8°    9.6°  171.2° -107.6°   33.2°  151.4°  -81.8°  -40.3°  138.5°  -35.1°  131.4°   H13                  
H14     139.9°  -46.8°  154.9°  -39.5°  -90.9°  122.4°  -37.9°  118.8°  112.4°  -32.1°  155.5°  -24.4°  149.0°   H14           
H15     -90.4°   83.0°  -80.2°   81.8°  -92.2°  -91.9°   77.4°  -81.4° -130.0°   90.7°  -84.8°  109.9°  -89.8°  114.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3kzha_ :   (ARG131)  (THR310)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Clostridium perfringens [TaxId: 1502]
 d3b1ob_ :   (PRO119)  (GLU304)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d3b1na_ :   (GLN124)  (GLY308)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d3b1oa_ :   (GLN124)  (ALA306)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d2pkna_ :   (LEU129)  (SER290)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d3b1pa_ :   (GLN124)  (ALA306)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d3b1ra_ :   (GLN124)  (ALA306)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]
 d3b1nb_ :   (GLN124)  (ALA306)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Burkholderia thailandensis [TaxId: 271848]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.72