Protein Concepts Dictionary

Tableau information

Concept source:  d3tyza_  amino acid (a.a.) range (VAL79)(ALA275)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHEHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (VAL79)   (ARG88) H1
	   (VAL91)   (THR97) E2
	   (LYS99)  (GLY110) H3
	  (HIS112)  (ARG118) E4
	  (ALA125)  (GLY133) H5
	  (LEU134)  (HIS140) E6
	  (ASP156)  (GLY176) H7
	  (LYS181)  (PRO186) E8
	  (ASN193)  (HIS203) H9
	  (LEU204)  (PHE210) H10
	  (PRO213)  (MET218) E11
	  (SER222)  (LEU228) H12
	  (ILE237)  (GLY250) H13
	  (GLN252)  (VAL256) E14
	  (LYS260)  (ALA275) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
E2     -171.3°   E2                                                                                                
H3      -20.2°  165.9°   H3                                                                                         
E4      150.2°  -26.4°  166.5°   E4                                                                                  
H5      -14.5°  163.6°  -15.4° -162.0°   H5                                                                           
E6      129.2°  -48.7°  144.0°  -22.6° -143.2°   E6                                                                    
H7      -77.0°  103.7°  -64.2°  129.3°  -62.5°  151.7°   H7                                                             
E8      122.6°  -58.4°  131.4°  -35.7°  136.9°  -18.3°  158.7°   E8                                                      
H9      -26.6°  145.2°  -40.4°  138.5°  -25.4°  127.2°  -70.2°  131.0°   H9                                               
H10     -76.2°  100.5°  -71.7°  120.6°  -63.2°  138.1°  -25.2°  155.7°  -58.9°   H10                                       
E11     120.4°  -66.0°  115.3°  -57.1°  129.1°  -51.2°  130.3°  -35.2° -144.4°  151.8°   E11                                
H12      95.7°  -86.4°  103.1°  -63.7°  109.5°   43.3° -160.4°   28.3° -110.8° -169.0°  -39.1°   H12                         
H13     -65.8°  106.1°  -77.3°  106.8°  -62.0°  108.6°  -69.5°  123.9°   39.2°  -45.7°  159.1°  124.3°   H13                  
E14     117.4°  -71.1°  103.6°  -74.2°  119.0°  -75.6°  103.3°  -61.7° -143.5°  126.5°  -27.2°  -63.7°  171.7°   E14           
H15     -60.5°  111.0°  -79.2°   97.7°  -65.3°   89.0°  -98.1°   99.3°  -40.8°  -75.8°  131.5°   93.8°  -30.8°  157.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3tyzb_ :    (VAL79)  (LYS276)   [view usage] : c.1.21.1 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Dihydropteroate synthetase |automated matches |Yersinia pestis [TaxId: 632]
 d3tyza_ :    (VAL79)  (ALA275)   [view usage] : c.1.21.1 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Dihydropteroate synthetase |automated matches |Yersinia pestis [TaxId: 632]
 d3h23a_ :    (SER75)  (MET271)   [view usage] : c.1.21.1 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Dihydropteroate synthetase |Dihydropteroate synthetase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d1ad1a_ :    (THR59)  (ASN265)   [view usage] : c.1.21.1 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Dihydropteroate synthetase |Dihydropteroate synthetase |Staphylococcus aureus [TaxId: 1280]
 d1twsa_ :    (VAL83)  (MET271)   [view usage] : c.1.21.1 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Dihydropteroate synthetase |Dihydropteroate synthetase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d2ogya_ :    (ASP52)  (ASN247)   [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |automated matches |Moorella thermoacetica [TaxId: 1525]
 d1aj0a_ :    (SER70)  (LYS276)   [view usage] : c.1.21.1 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Dihydropteroate synthetase |Dihydropteroate synthetase |Escherichia coli [TaxId: 562]
 d2e7fa_ :    (ASP52)  (ASN247)   [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |automated matches |Moorella thermoacetica [TaxId: 1525]
 d4nhva_ :    (VAL83)  (MET271)   [view usage] : c.1.21.1 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Dihydropteroate synthetase |Dihydropteroate synthetase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1