Protein Concepts Dictionary

Tableau information

Concept source:  d2uyfa_  amino acid (a.a.) range (LEU138)(SER299)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHEHEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU138)  (GLY145) H1
	  (ASP148)  (GLY152) E2
	  (LEU154)  (GLY160) H3
	  (GLY160)  (ARG176) E4
	  (PRO180)  (PRO185) E5
	  (SER187)  (GLU193) H6
	  (VAL197)  (LEU202) E7
	  (THR204)  (GLY217) H8
	  (ARG223)  (PRO227) E9
	  (ILE232)  (SER238) H10
	  (ASP240)  (THR244) E11
	  (GLN247)  (GLY258) H12
	  (GLY258)  (PRO263) E13
	  (PRO269)  (HIS278) E14
	  (PRO285)  (SER299) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
E2     -142.9°   E2                                                                                                
H3      -38.9° -137.1°   H3                                                                                         
E4      133.6°  -42.4° -170.6°   E4                                                                                  
E5      -57.5°   98.7°  -40.8° -133.5°   E5                                                                           
H6      107.1° -107.5°  105.9°   81.2° -144.5°   H6                                                                    
E7      -64.2° -131.6°   28.9° -160.5°  -59.3°  -85.3°   E7                                                             
H8     -147.2°  -15.0° -127.3°  -54.5°   93.6° -105.6° -117.0°   H8                                                      
E9       37.3° -158.3°   22.3°  159.3°  -62.8°  -85.7°  -30.1° -145.5°   E9                                               
H10    -132.9°   33.9° -162.2°   10.9° -122.8°   91.6°  162.5°   47.5°  166.8°   H10                                       
E11     -60.1° -113.8°  -24.5° -155.9°   28.7° -116.3°  -31.1°  102.9°  -44.6° -145.7°   E11                                
H12      98.1°  -83.0°  134.9°   41.5° -140.2°   68.1°  142.6°  -95.9°  118.4°  -49.0°  158.1°   H12                         
E13     -99.3°   68.1°  -70.2°  110.5°   42.6° -128.9°  -67.9°   57.1°  -90.2°  101.5°  -45.9° -149.5°   E13                  
E14     -38.6°  170.7°   35.3°  146.3°  -75.1°   75.5°   39.3°  156.2°   13.2° -155.2°   57.7°  106.2° -103.1°   E14           
H15    -123.2°  -26.7° -141.2°   32.1° -101.4°  112.8° -153.7°  -41.6° -158.9°   21.4° -126.0°   63.8°  -85.7° -160.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2y7rf_ :   (ASN137)  (LEU297)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
 d2y84h_ :   (LEU138)  (SER299)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
 d2uyea_ :   (LEU138)  (SER299)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia cepacia [TaxId: 292]
 d2uyfb_ :   (ASN137)  (SER299)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia cepacia [TaxId: 292]
 d2y7ka_ :   (LEU138)  (ASP284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
 d2y7kb_ :   (LEU138)  (ASP284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
 d1utbb_ :   (LEU138)  (ASP284)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |LysR-type regulatory protein DntR |Burkholderia sp. [TaxId: 36773]
 d1uthb_ :   (ASN137)  (SER299)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |LysR-type regulatory protein DntR |Burkholderia sp. [TaxId: 36773]
 d2uyfa_ :   (LEU138)  (SER299)   [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia cepacia [TaxId: 292]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.94