Protein Concepts Dictionary

Tableau information

Concept source:  d3i95a_  amino acid (a.a.) range (ASN18)(LEU243)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEHHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN18)   (LEU35) H1
	   (LYS38)   (PRO43) E2
	   (TYR48)   (GLU54) E3
	   (GLU56)   (PRO68) E4
	   (ARG71)   (GLY81) E5
	   (GLY83)   (GLU94) E6
	  (PHE102)  (ALA108) E7
	  (SER114)  (GLN124) E8
	  (PRO130)  (GLY141) H9
	  (PRO153)  (PHE158) H10
	  (TYR161)  (ILE165) E11
	  (ASN169)  (VAL193) H12
	  (SER198)  (GLN217) H13
	  (ASN219)  (PHE230) H14
	  (GLU232)  (LEU243) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                       
E2      124.4°   E2                                                                                                
E3      148.8°   27.5°   E3                                                                                         
E4       22.5°  137.2°  150.3°   E4                                                                                  
E5     -158.3°  -55.4°  -40.6°  167.3°   E5                                                                           
E6       24.8°  116.1°  131.6°  -21.2°  171.5°   E6                                                                    
E7     -155.8°  -60.5°  -45.7°  162.1°   -5.3° -176.5°   E7                                                             
E8      -32.4°  106.4°  121.7°  -31.2°  161.4°  -10.1°  166.7°   E8                                                      
H9      136.5°  -98.7°  -74.4°  121.7°  -47.4°  139.6°  -43.6° -145.6°   H9                                               
H10      37.5°  161.5° -170.0°   29.1° -138.5°   49.9° -133.2°   60.0°   99.0°   H10                                       
E11    -150.7°  -57.0°  -46.0°  163.6°   -7.6° -170.2°    7.1° -162.7°   50.0°  134.7°   E11                                
H12     -15.9°  110.4°  133.2°  -29.8° -158.8°   18.1° -160.2°   20.8°  150.8°   52.2° -153.1°   H12                         
H13    -160.3°  -48.1°  -33.2°  174.6°    7.7° -163.9°  -13.0°  153.8°  -53.0° -146.2°  -13.1° -155.2°   H13                  
H14    -100.5°  -62.9°   77.5° -122.0°   58.9° -119.5°   58.9° -118.6°   93.7°  110.9°   52.0° -101.4°  -59.8°   H14           
H15      39.7°  156.4° -154.3°   20.9° -147.2°  -41.1°  142.3°  -50.5°  100.9°   18.1°  146.4°  -50.3°  153.7°  128.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2g18i_ :    (PRO15)  (VAL239)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |automated matches |Anabaena sp. [TaxId: 1167]
 d2g18a_ :    (PRO15)  (VAL239)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |automated matches |Anabaena sp. [TaxId: 1167]
 d4eoda_ :    (PRO19)  (PHE244)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Synechocystis sp. [TaxId: 1111708]
 d3nb8a_ :    (PRO19)  (PHE244)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Synechocystis sp. [TaxId: 1148]
 d3f0la_ :    (PRO19)  (VAL242)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Synechocystis sp. [TaxId: 1148]
 d4eoea_ :    (PRO19)  (VAL242)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Synechocystis sp. [TaxId: 1111708]
 d3i95a_ :    (ASN18)  (LEU243)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Synechocystis sp. [TaxId: 1148]
 d2dkea_ :    (PRO19)  (VAL242)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Synechocystis sp. [TaxId: 1148]
 d2d1ea_ :    (PRO19)  (VAL242)   [view usage] : d.248.2.1 |Coproporphyrinogen III oxidase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Ferredoxin-dependent bilin reductase |Synechocystis sp. [TaxId: 1148]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.248