Protein Concepts Dictionary

Tableau information

Concept source:  d2bifa2  amino acid (a.a.) range (SER250)(ASN437)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHHHHEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER250)  (ARG255) E1
	  (SER259)  (GLY265) H2
	  (SER274)  (ASN292) H3
	  (ASP295)  (SER301) E4
	  (ARG305)  (GLU311) H5
	  (VAL315)  (LYS321) E6
	  (THR335)  (ASP341) H7
	  (TYR343)  (ASP353) H8
	  (SER364)  (LEU372) H9
	  (LEU372)  (ARG381) H10
	  (ASN384)  (CYS389) E11
	  (GLN391)  (LEU402) H12
	  (ALA405)  (LEU412) H13
	  (THR418)  (PRO424) E14
	  (TYR427)  (ASN437) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2       61.3°   H2                                                                                                
H3      175.3°  119.5°   H3                                                                                         
E4      -24.8°   59.0°  159.9°   E4                                                                                  
H5      127.0° -120.8°  -48.3° -151.6°   H5                                                                           
E6      -58.7°   65.0°  126.0°  -33.9° -172.8°   E6                                                                    
H7       66.3°   67.0° -118.5°   41.4° -166.2°    7.6°   H7                                                             
H8     -158.1°  -98.0°   21.6°  149.7°  -55.4°  121.3° -114.2°   H8                                                      
H9      137.7° -160.0°  -41.0°  140.3°  -46.7°  126.5°  122.1°  -62.3°   H9                                               
H10     148.0° -118.5°  -27.2° -172.7°   22.0°  153.1° -145.5°  -34.2°  -43.1°   H10                                       
E11     -12.3°   56.4°  172.1°  -13.3°  139.2°  -46.8°   54.3° -153.8°  143.6° -159.4°   E11                                
H12    -151.5°  -92.3°   31.4°  132.8°  -74.2°  102.1°  -94.9°   19.4°  -70.1°  -52.4°  141.3°   H12                         
H13     -61.1°  -95.9°  114.3°  -85.4°   66.2° -118.7°  126.2° -118.6°   91.6°   88.1°  -73.4°  137.9°   H13                  
E14     150.8°  110.8°  -34.0°  126.0°  -81.9°   92.1°   84.6°   39.4°  -56.6°  -61.2°  138.9°   26.9° -146.1°   E14           
E15     -49.2°  -84.2°  126.1°  -74.0°   77.8° -107.8° -115.4° -126.7°  104.7°   99.1°  -61.4° -144.9°   13.2°  159.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1fbta_ :     (ARG1)  (TYR187)   [view usage] : c.60.1.4 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1bifa2 :   (SER250)  (ASN437)   [view usage] : c.60.1.4 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1riib_ :     (SER6)  (ASP232)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Mycobacterium tuberculosis [TaxId: 1773]
 d1riia_ :     (SER6)  (ASP232)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Mycobacterium tuberculosis [TaxId: 1773]
 d1k6ma2 :   (SER252)  (ASN439)   [view usage] : c.60.1.4 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |Human (Homo sapiens) [TaxId: 9606]
 d1c7za_ :     (MET1)  (TYR188)   [view usage] : c.60.1.4 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2bifa2 :   (SER250)  (ASN437)   [view usage] : c.60.1.4 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, phosphatase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.60