Protein Concepts Dictionary

Tableau information

Concept source:  d3ty4a_  amino acid (a.a.) range (ARG5)(PRO219)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG5)   (ASP15) E1
	   (ASP15)   (ASN31) H2
	   (LYS37)   (ASP46) E3
	   (GLY48)   (ARG54) H4
	   (ARG62)   (LYS68) H5
	   (ASN72)   (PRO82) E6
	   (SER91)  (GLY101) H7
	  (ASN105)  (SER111) E8
	  (ASP121)  (GLU127) E9
	  (LYS135)  (GLN141) E10
	  (ARG147)  (ILE152) E11
	  (ARG153)  (GLU157) E12
	  (GLU157)  (SER180) H13
	  (PRO189)  (HIS195) E14
	  (VAL202)  (PRO219) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2     -160.2°   H2                                                                                                
E3      -32.0° -159.3°   E3                                                                                         
H4       64.6° -123.6°   35.7°   H4                                                                                  
H5     -161.0°   19.9°  164.0°  134.4°   H5                                                                           
E6       -5.9°  160.8°  -35.0°  -68.9° -156.3°   E6                                                                    
H7      152.8°  -47.0°  125.2°  101.5°  -38.8° -150.6°   H7                                                             
E8      -89.5°   73.5° -121.0° -140.9°   74.5°  -87.8°  112.9°   E8                                                      
E9       78.7° -119.2°   48.2°  -37.0° -115.9°   79.8°  -77.1°  166.8°   E9                                               
E10      35.4°  159.7°  -37.0°  -69.6° -139.8°   31.6° -119.2° -106.4°   60.4°   E10                                       
E11    -173.7°  -15.1°  149.0°  114.6°  -20.8° -175.8°   32.7°  -87.9°  104.4°  150.9°   E11                                
E12     174.3°  -25.1°  145.1°  114.6°  -20.3° -169.7°   21.9°  -93.9°   97.4°  139.0°  -11.9°   E12                         
H13    -116.4°   44.4° -142.7°  136.5°   52.8° -116.4°   90.0°  -32.2°  160.9° -138.6°   59.5°  -68.3°   H13                  
E14      39.0° -160.8°   23.4°  -51.7° -146.3°   38.1° -113.8°  122.8°  -44.0°   18.6° -145.9° -135.7°  154.0°   E14           
H15    -157.8°  -10.8°  148.7°  113.3°   29.5° -161.4°   48.0°  -79.6°  113.6°  166.8°   16.0°   27.9°  -48.3°  157.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ty3a_ :     (ARG5)  (PRO219)   [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
 d3ah3a_ :     (ARG4)  (PRO194)   [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Thermus thermophilus [TaxId: 262724]
 d3ty4a_ :     (ARG5)  (PRO219)   [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
 d3ty4b_ :     (THR4)  (PRO219)   [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Schizosaccharomyces pombe [TaxId: 284812]
 d1x0la_ :     (ARG4)  (PRO194)   [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Thermus thermophilus [TaxId: 274]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.77