Protein Concepts Dictionary

Tableau information

Concept source:  d3voaa1  amino acid (a.a.) range (ALA12)(ALA202)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHHHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA12)   (GLY20) E1
	   (GLY21)   (HIS33) H2
	   (GLU39)   (THR45) E3
	   (GLY47)   (SER53) H4
	   (GLU56)   (GLY62) E5
	   (GLY62)   (ARG67) H6
	   (PRO75)   (ARG86) H7
	   (GLU87)   (ILE93) H8
	   (ASP97)  (SER103) E9
	  (GLY110)  (GLY125) H10
	  (LEU127)  (PHE138) E11
	  (ARG141)  (ALA157) H12
	  (ASP159)  (PRO165) E13
	  (PRO165)  (VAL173) H14
	  (PRO178)  (ALA202) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2     -133.8°   H2                                                                                                
E3      -21.8° -153.2°   E3                                                                                         
H4      143.2°    9.7°  162.9°   H4                                                                                  
E5      -43.4° -175.6°  -23.1°  173.4°   E5                                                                           
H6       21.7° -112.1°   42.9° -121.5°   65.1°   H6                                                                    
H7      137.0°  -64.1°  123.8°  -59.8°  115.3°  136.7°   H7                                                             
H8      144.3°   21.2° -165.6°   14.7° -163.2° -124.0°  -69.1°   H8                                                      
E9      -18.1°  121.4°  -38.3°  129.7°  -56.8°   16.7°  151.5°  127.3°   E9                                               
H10     160.5°  -63.7°  138.8°  -54.8°  118.5° -170.2°  -33.9°  -55.2° -172.8°   H10                                       
E11     -26.5°  115.5°  -46.2°  123.2°  -63.2°   20.9°  157.5°  119.5°   -8.5° -168.4°   E11                                
H12     157.1°  -66.2°  135.6°  -57.5°  115.9° -168.4°  -31.8°  -58.5°  172.0°   -3.5° -170.7°   H12                         
E13     -42.2°   96.4°  -63.5°  104.3°  -82.2°  -25.7°  148.1°  102.2°  -25.5°  157.3°  -19.2° -160.7°   E13                  
H14     -91.8°   48.0° -113.5°   54.7° -131.4°  -71.9°  111.1°   52.6°  -75.6°  107.7°  -68.6°  110.9°   50.1°   H14           
H15     159.8°  -64.7°  138.1°  -55.8°  117.6° -171.4°  -34.9°  -55.8°  171.5°   -1.3°  167.5°   -3.7°  157.7°  108.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3vo8a1 :    (ALA12)  (ALA202)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Staphylococcus aureus [TaxId: 158878]
 d1fsza1 :    (LYS39)  (THR227)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Methanococcus jannaschii [TaxId: 2190]
 d3wgma1 :    (ALA12)  (ALA202)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Staphylococcus aureus [TaxId: 1280]
 d3voaa1 :    (ALA12)  (ALA202)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Staphylococcus aureus [TaxId: 158878]
 d2vapa1 :    (LYS39)  (GLU224)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Methanococcus jannaschii [TaxId: 2190]
 d4m8ia1 :    (ALA12)  (ASN188)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |automated matches |Staphylococcus epidermidis [TaxId: 176279]
 d1w5fa1 :    (LEU22)  (VAL204)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Thermotoga maritima [TaxId: 2336]
 d2vxya1 :    (SER13)  (ALA202)   [view usage] : c.32.1.0 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d3wgja1 :    (ALA12)  (ASN188)   [view usage] : c.32.1.1 |Tubulin nucleotide-binding domain-like |Tubulin nucleotide-binding domain-like |Tubulin, GTPase domain |Cell-division protein FtsZ |Staphylococcus aureus [TaxId: 1280]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.32