Protein Concepts Dictionary

Tableau information

Concept source:  d2qioa_  amino acid (a.a.) range (LYS7)(GLU213)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS7)   (GLY13) E1
	   (ILE20)   (GLY32) H2
	   (ILE36)   (ALA40) E3
	   (GLY41)   (GLU56) H4
	   (SER60)   (THR68) E5
	   (ASN69)   (GLU83) H6
	   (HIS88)   (ILE94) E7
	   (ASN98)  (GLY104) H8
	  (SER110)  (ALA122) H9
	  (PHE123)  (VAL135) H10
	  (GLU138)  (LEU148) E11
	  (VAL159)  (ASP177) H12
	  (GLY182)  (GLY191) E13
	  (THR195)  (VAL201) H14
	  (PHE204)  (GLU213) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2     -167.6°   H2                                                                                                
E3      -13.8° -174.9°   E3                                                                                         
H4      141.5°  -29.3°  154.6°   H4                                                                                  
E5      -47.7°  144.5°  -36.3°  148.9°   E5                                                                           
H6      155.6°  -12.1°  166.7°  -24.5° -156.6°   H6                                                                    
E7       -9.1°  161.7°  -21.4°  133.2°  -51.0°  151.0°   E7                                                             
H8      -76.1°  105.4°  -79.7°   84.6°   68.6° -107.6°  -68.6°   H8                                                      
H9     -162.5°    5.3° -174.4°  -24.7°  149.0°   -7.8° -156.4° -103.9°   H9                                               
H10     156.7°  -24.1°  150.9°  -52.2°  135.4°  -28.7°  163.2° -127.2°  -27.7°   H10                                       
E11     -27.5°  146.8°  -37.7°  117.5°  -57.3°  139.6°  -18.5°  -51.9°  142.2°  167.3°   E11                                
H12     159.0°  -32.9°  145.2°  -59.1°  113.4°  -44.3°  164.4° -107.7°  -38.1°  -27.9° -158.8°   H12                         
E13     -42.5°  127.7°  -55.6°   99.1°  -80.2°  118.3°  -34.2°  -57.8°  122.5°  144.3°  -23.0° -156.5°   E13                  
H14      35.8° -151.5°   33.0°  133.0°  -27.8° -156.3°   33.5°  -48.8° -151.6° -160.0°  -31.8° -132.7°  -54.4°   H14           
H15     130.0°  -51.7°  133.2°  -39.9°  109.2°  -56.5°  121.8°   54.1°  -51.1°  -73.1°  103.7°  -59.4°   98.6°  100.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3pjea_ :     (ARG8)  (VAL213)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3gr6d_ :     (LYS7)  (GLU213)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Staphylococcus aureus [TaxId: 1280]
 d3oiga_ :     (ARG8)  (SER236)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Bacillus subtilis [TaxId: 1423]
 d3oifa_ :     (ARG8)  (GLU214)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Bacillus subtilis [TaxId: 1423]
 d2wyua_ :     (LYS9)  (GLN213)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2qioa_ :     (LYS7)  (GLU213)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3ojfb_ :     (LYS7)  (SER235)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Bacillus cereus [TaxId: 226900]
 d2pd3a_ :     (LYS8)  (ALA213)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Helicobacter pylori [TaxId: 210]
 d2wyva_ :     (LYS9)  (GLN213)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d3pjfb_ :     (LYS7)  (VAL213)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3gr6g_ :     (LYS7)  (GLU213)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Staphylococcus aureus [TaxId: 1280]
 d1ulub_ :     (LYS9)  (ARG210)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Thermus thermophilus [TaxId: 274]
 d2wyuc_ :     (LYS9)  (ALA215)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Thermus thermophilus HB8 [TaxId: 300852]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2